AliMC.cxx

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/**************************************************************************
 * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
 *                                                                        *
 * Author: The ALICE Off-line Project.                                    *
 * Contributors are mentioned in the code where appropriate.              *
 *                                                                        *
 * Permission to use, copy, modify and distribute this software and its   *
 * documentation strictly for non-commercial purposes is hereby granted   *
 * without fee, provided that the above copyright notice appears in all   *
 * copies and that both the copyright notice and this permission notice   *
 * appear in the supporting documentation. The authors make no claims     *
 * about the suitability of this software for any purpose. It is          *
 * provided "as is" without express or implied warranty.                  *
 **************************************************************************/

/* $Id$ */

// This class is extracted from the AliRun class
// and contains all the MC-related functionality
// The number of dependencies has to be reduced...
// Author: F.Carminati
//         Federico.Carminati@cern.ch

#include <string.h>

#include <RVersion.h>
#include <TArrayI.h>
#include <TClonesArray.h>
#include <TFile.h>
#include <TGeoGlobalMagField.h>
#include <TGeoManager.h>
#include <TParticle.h>
#include <TROOT.h>
#include <TStopwatch.h>
#include <TSystem.h>
#include <TVirtualMC.h>
#include <TMCVerbose.h>
#include <TTree.h>

#include "AliCDBEntry.h"
#include "AliCDBManager.h"
#include "AliCDBStorage.h"
#include "AliDetector.h"
#include "AliFileUtilities.h"
#include "AliGenerator.h"
#include "AliGeomManager.h"
#include "AliHeader.h"
#include "AliHit.h"
#include "AliLego.h"
#include "AliLog.h"
#include "AliMC.h"
#include "AliMagF.h"
#include "AliRun.h"
#include "AliSimulation.h"
#include "AliStack.h"
#include "AliTrackReference.h"
#include "AliTransportMonitor.h"
#include <iostream>

using std::endl;
using std::cout;
ClassImp(AliMC)

//_______________________________________________________________________
AliMC::AliMC() :
  fMC(0),
  fGenerator(0),
  fSaveRndmStatus(kFALSE),
  fSaveRndmEventStatus(kFALSE),
  fReadRndmStatus(kFALSE),
  fUseMonitoring(kFALSE),
  fRndmFileName("random.root"),
  fEventEnergy(0),
  fSummEnergy(0),
  fSum2Energy(0),
  fTrRmax(1.e10),
  fTrZmax(1.e10),
  fPuRmax(-1.),
  fPuZmax(-1.),
  fRDecayMax(1.e10),
  fRDecayMin(-1.),
  fDecayPdg(0),
  fImedia(0),
  fTransParName("\0"),
  fMonitor(0),
  fHitLists(0),
  fTmpTreeTR(0),
  fTmpFileTR(0),
  fTrackReferences(),
  fTmpTrackReferences()

{
  //default constructor
  DecayLimits();
}

//_______________________________________________________________________
AliMC::AliMC(const char *name, const char *title) :
  TVirtualMCApplication(name, title),
  fMC(0),
  fGenerator(0),
  fSaveRndmStatus(kFALSE),
  fSaveRndmEventStatus(kFALSE),
  fReadRndmStatus(kFALSE),
  fUseMonitoring(kFALSE),
  fRndmFileName("random.root"),
  fEventEnergy(0),
  fSummEnergy(0),
  fSum2Energy(0),
  fTrRmax(1.e10),
  fTrZmax(1.e10),
  fPuRmax(-1.),
  fPuZmax(-1.),
  fRDecayMax(1.e10),
  fRDecayMin(-1.),
  fDecayPdg(0),
  fImedia(new TArrayI(1000)),
  fTransParName("\0"),
  fMonitor(0),
  fHitLists(new TList()),
  fTmpTreeTR(0),
  fTmpFileTR(0),
  fTrackReferences(AliTrackReference::Class(), 100),
  fTmpTrackReferences(AliTrackReference::Class(), 100)
{
  //constructor
  // Set transport parameters
  SetTransPar();
  DecayLimits();
  // Prepare the tracking medium lists
  for(Int_t i=0;i<1000;i++) (*fImedia)[i]=-99;
}

//_______________________________________________________________________
AliMC::~AliMC()
{
  //destructor
  delete fGenerator;
  delete fImedia;
  delete fHitLists;
  delete fMonitor;
  // Delete track references
}


void AliMC::CacheVMCInstance()
{
  // cache the pointer to the VMC instance
  // this is done in order to avoid penalties coming from the thread_local storage nature of TVirtualMC::GetMC()

  // This instance is available only in functions called during event processing
  // The global instance, gMC == TVirtualMC::GetMC() should be used in functions called in initialization
  // (for geometry construction etc.)

  fMC = TVirtualMC::GetMC();
  TIter next(gAlice->Modules());
  AliModule *detector;
  AliInfo("CacheVMCInstance");
  while((detector = static_cast<AliModule*>(next()))) {
    detector->CacheVMCInstance(fMC);
  }
}

//_______________________________________________________________________
void  AliMC::ConstructGeometry()
{
  //
  // Either load geometry from file or create it through usual
  // loop on detectors. In the first case the method
  // AliModule::CreateMaterials() only builds fIdtmed and is postponed
  // at InitGeometry().
  //

  if(AliSimulation::Instance()->IsGeometryFromFile()){ //load geometry either from CDB or from file
    if(IsGeometryFromCDB()){
      AliInfo("Loading geometry from CDB default storage");
      AliCDBPath path("GRP","Geometry","Data");
      AliCDBEntry *entry=AliCDBManager::Instance()->Get(path.GetPath());
      if(!entry) AliFatal("Unable to load geometry from CDB!");
      entry->SetOwner(0);
      gGeoManager = (TGeoManager*) entry->GetObject();
      if (!gGeoManager) AliFatal("TGeoManager object not found in the specified CDB entry!");
    }else{
      // Load geometry
      const char *geomfilename = AliSimulation::Instance()->GetGeometryFile();
      if(gSystem->ExpandPathName(geomfilename)){
  AliInfo(Form("Loading geometry from file:\n %40s",geomfilename));
  TGeoManager::Import(geomfilename);
      }else{
  AliInfo(Form("Geometry file %40s not found!\n",geomfilename));
  return;
      }
    }
    TVirtualMC::GetMC()->SetRootGeometry();
  }else{
    // Create modules, materials, geometry
    if (!gGeoManager) new TGeoManager("ALICE", "ALICE geometry");
    TStopwatch stw;
    TIter next(gAlice->Modules());
    AliModule *detector;
    AliDebug(1, "Geometry creation:");
    while((detector = dynamic_cast<AliModule*>(next()))) {
      stw.Start();
      // Initialise detector materials and geometry
      detector->CreateMaterials();
      detector->CreateGeometry();
      AliInfo(Form("%10s R:%.2fs C:%.2fs",
       detector->GetName(),stw.RealTime(),stw.CpuTime()));
    }
  }

}

//_______________________________________________________________________
Bool_t  AliMC::MisalignGeometry()
{
  // Call misalignment code if AliSimulation object was defined.

  if(!AliSimulation::Instance()->IsGeometryFromFile()){
    //Set alignable volumes for the whole geometry
    SetAllAlignableVolumes();
  }
  // Misalign geometry via AliSimulation instance
  if (!AliSimulation::Instance()) return kFALSE;
  AliGeomManager::SetGeometry(gGeoManager);
  if(!AliGeomManager::CheckSymNamesLUT("ALL"))
    AliFatal("Current loaded geometry differs in the definition of symbolic names!");

  return AliSimulation::Instance()->MisalignGeometry(AliRunLoader::Instance());
}

//_______________________________________________________________________
void  AliMC::ConstructOpGeometry()
{
  //
  // Loop all detector modules and call DefineOpticalProperties() method
  //

  TIter next(gAlice->Modules());
  AliModule *detector;
  AliInfo("Optical properties definition");
  while((detector = dynamic_cast<AliModule*>(next()))) {
    // Initialise detector geometry
    if(AliSimulation::Instance()->IsGeometryFromFile()) detector->CreateMaterials();
    // Initialise detector optical properties
    detector->DefineOpticalProperties();
  }
}

#include <TPDGCode.h>
//_______________________________________________________________________
void  AliMC::AddParticles()
{
  //
  // Add particles (not present in Geant3 or Geant4)
  //

  cout << "########## AliMC::AddParticles"  << endl;

  //Hypertriton
  TVirtualMC::GetMC()->DefineParticle(1010010030, "HyperTriton", kPTHadron, 2.99131 , 1.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 3, kFALSE);
  //Anti-Hypertriton
  TVirtualMC::GetMC()->DefineParticle(-1010010030, "AntiHyperTriton", kPTHadron, 2.99131 , 1.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 3, kFALSE);

  //Hyper hydrogen 4
  TVirtualMC::GetMC()->DefineParticle(1010010040, "Hyperhydrog4", kPTHadron, 3.931 , 1.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 4, kFALSE);
  //Anti-Hyper hydrogen 4
  TVirtualMC::GetMC()->DefineParticle(-1010010040, "AntiHyperhydrog4", kPTHadron, 3.931 , 1.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 4, kFALSE);

  //Hyper helium 4
  TVirtualMC::GetMC()->DefineParticle(1010020040, "Hyperhelium4", kPTHadron, 3.929 , 2.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 4, kFALSE);
  //Anti-Hyper helium 4
  TVirtualMC::GetMC()->DefineParticle(-1010020040, "AntiHyperhelium4", kPTHadron, 3.929 , 2.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 4, kFALSE);

  //Hyper helium 5
  TVirtualMC::GetMC()->DefineParticle(1010020050, "Hyperhelium5", kPTHadron, 4.841 , 2.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 5, kFALSE);
  //Anti-Hyper helium 5
  TVirtualMC::GetMC()->DefineParticle(-1010020050, "AntiHyperhelium5", kPTHadron, 4.841 , 2.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 5, kFALSE);

  //Double Hyper hydrogen 4
  TVirtualMC::GetMC()->DefineParticle(1020010040, "DoubleHyperhydrogen4", kPTHadron, 4.106 , 1.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 4, kFALSE);
  //Double Anti-Hyper hydrogen 4
  TVirtualMC::GetMC()->DefineParticle(-1020010040, "DoubleAntiHyperhydrogen4", kPTHadron, 4.106 , 1.0, 2.632e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 4, kFALSE);

  //Lambda-Neutron
  TVirtualMC::GetMC()->DefineParticle(1010000020, "LambdaNeutron", kPTNeutron, 2.054 , 0.0, 2.632e-10,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Anti-Lambda-Neutron
  TVirtualMC::GetMC()->DefineParticle(-1010000020, "AntiLambdaNeutron", kPTNeutron, 2.054 , 0.0, 2.632e-10,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //H-Dibaryon
  TVirtualMC::GetMC()->DefineParticle(1020000020, "Hdibaryon", kPTNeutron, 2.23, 0.0, 2.632e-10,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Anti-H-Dibaryon
  TVirtualMC::GetMC()->DefineParticle(-1020000020, "AntiHdibaryon", kPTNeutron, 2.23, 0.0, 2.632e-10,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Xi-Proton
  TVirtualMC::GetMC()->DefineParticle(1020010020, "Xi0Proton", kPTHadron, 2.248 , 1.0, 1.333e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Anti-Xi-Proton
  TVirtualMC::GetMC()->DefineParticle(-1020010020, "AntiXi0Proton", kPTHadron, 2.248 , 1.0, 1.333e-10,"Ion", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Lambda-Neutron-Neutron
  TVirtualMC::GetMC()->DefineParticle(1010000030, "LambdaNeutronNeutron", kPTNeutron, 2.99 , 0.0, 2.632e-10,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 3, kFALSE);

  //Anti-Lambda-Neutron-Neutron
  TVirtualMC::GetMC()->DefineParticle(-1010000030, "AntiLambdaNeutronNeutron", kPTNeutron, 2.99 , 0.0, 2.632e-10,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 3, kFALSE);

  //Omega-Proton
  TVirtualMC::GetMC()->DefineParticle(1030000020, "OmegaProton", kPTNeutron, 2.592, 0.0, 2.632e-10,"Hadron", 0.0, 2, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Anti-Omega-Proton
  TVirtualMC::GetMC()->DefineParticle(-1030000020, "AntiOmegaProton", kPTNeutron, 2.592, 0.0, 2.632e-10,"Hadron", 0.0, 2, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Omega-Neutron
  TVirtualMC::GetMC()->DefineParticle(1030010020, "OmegaNeutron", kPTHadron, 2.472, 1.0, 2.190e-22,"Hadron", 0.0, 2, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Anti-Omega-Neutron
  TVirtualMC::GetMC()->DefineParticle(-1030010020, "AntiOmegaNeutron", kPTHadron, 2.472, 1.0, 2.190e-22,"Hadron", 0.0, 2, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Omega-Omega
  TVirtualMC::GetMC()->DefineParticle(1060020020, "OmegaOmega", kPTHadron, 3.229, 2.0, 2.632e-10,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Anti-Omega-Omega
  TVirtualMC::GetMC()->DefineParticle(-1060020020, "AntiOmegaOmega", kPTHadron, 3.229, 2.0, 2.632e-10,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Lambda(1405)-Proton
  TVirtualMC::GetMC()->DefineParticle(1010010021, "Lambda1405Proton", kPTHadron, 2.295, 1.0, 1.316e-23,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Anti-Lambda(1405)-Proton
  TVirtualMC::GetMC()->DefineParticle(-1010010021, "AntiLambda1405Proton", kPTHadron, 2.295, 1.0, 1.316e-23,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Lambda(1405)-Lambda(1405)
  TVirtualMC::GetMC()->DefineParticle(1020000021, "Lambda1405Lambda1405", kPTNeutron, 2.693, 0.0, 1.316e-23,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);

  //Anti-Lambda(1405)-Lambda(1405)
  TVirtualMC::GetMC()->DefineParticle(-1020000021, "AntiLambda1405Lambda1405", kPTNeutron, 2.693, 0.0, 1.316e-23,"Hadron", 0.0, 0, 1, 0, 0, 0, 0, 0, 2, kFALSE);


  //Resonances not in Generators
  // f0(980) assume 70 MeV as width (PDG: 40 to 100 MeV)
  TVirtualMC::GetMC()->DefineParticle(9010221, "f0_980", kPTNeutron, 0.98 , 0.0, 9.403e-24,"Hadron", 7e-2, 0, 1, 1, 0, 0, 1, 0, 0, kTRUE);

  // f2(1270) (PDG: width = 185 MeV)
  TVirtualMC::GetMC()->DefineParticle(225, "f2_1270", kPTNeutron, 1.275 , 0.0, 3.558e-24,"Hadron", 0.185, 4, 1, 1, 0, 0, 1, 0, 0, kTRUE);

  // Xi_0(1820)
  TVirtualMC::GetMC()->DefineParticle( 123324,"Xi_0_1820",    kPTNeutron,1.8234,0.0,2.742550e-23,"Hadron",0.024, 3, -1, 0, 1,  1, 0, 0,  1, kTRUE);
  TVirtualMC::GetMC()->DefineParticle(-123324,"Xi_0_Bar_1820",kPTNeutron,1.8234,0.0,2.742550e-23,"Hadron",0.024, 3, -1, 0, 1, -1, 0, 0, -1, kTRUE);

  int xi_0_1820_mode[6][3] = {{0}};
  float xi_0_1820_ratio[6] = {100.f,0.f,0.f,0.f,0.f,0.f};
  xi_0_1820_mode[0][0] = 3122; // Lambda
  xi_0_1820_mode[0][1] = 310;  // K0s
  TVirtualMC::GetMC()->SetDecayMode(123324,xi_0_1820_ratio,xi_0_1820_mode);
  xi_0_1820_mode[0][0] = -3122; // Lambda-bar
  TVirtualMC::GetMC()->SetDecayMode(-123324,xi_0_1820_ratio,xi_0_1820_mode);

  // Xi-+(1820)
  TVirtualMC::GetMC()->DefineParticle(123314,"Xi_Minus_1820",kPTHadron,1.8234,-1.0,2.742550e-23,"Hadron",0.024, 3, -1, 0, 1, -1, 0, 0,  1, kTRUE);
  TVirtualMC::GetMC()->DefineParticle(-123314,"Xi_Plus_1820",kPTHadron,1.8234, 1.0,2.742550e-23,"Hadron",0.024, 3, -1, 0, 1,  1, 0, 0, -1, kTRUE);

  int xi_charged_1820_mode[6][3] = {{0}};
  float xi_charged_1820_ratio[6] = {100.f,0.f,0.f,0.f,0.f,0.f};
  xi_charged_1820_mode[0][0] = 3122; // Lambda
  xi_charged_1820_mode[0][1] = -321;  // K-
  TVirtualMC::GetMC()->SetDecayMode(123314,xi_charged_1820_ratio,xi_charged_1820_mode);
  xi_charged_1820_mode[0][0] = -3122; // Lambda-bar
  xi_charged_1820_mode[0][1] = 321;  // K+
  TVirtualMC::GetMC()->SetDecayMode(-123314,xi_charged_1820_ratio,xi_charged_1820_mode);

  // Ps - hidden strange (s-sbar) pentaquarks
  TVirtualMC::GetMC()->DefineParticle( 9322134, "Ps_2100", kPTHadron, 2.1 ,  1.0, 1.6455e-23,"Hadron", 4.e-2, 3, -1, 0, 0, 0, 0, 0,  1, kTRUE);
  TVirtualMC::GetMC()->DefineParticle(-9322134, "AntiPs_2100", kPTHadron, 2.1 , -1.0, 1.6455e-23,"Hadron", 4.e-2, 3, -1, 0, 0, 0, 0, 0, -1, kTRUE);
  TVirtualMC::GetMC()->DefineParticle( 9322136, "Ps_2500", kPTHadron, 2.5 ,  1.0, 1.6455e-23,"Hadron", 4.e-2, 5, 1, 0, 0, 0, 0, 0,  1, kTRUE);
  TVirtualMC::GetMC()->DefineParticle(-9322136, "AntiPs_2500", kPTHadron, 2.5 , -1.0, 1.6455e-23,"Hadron", 4.e-2, 5, 1, 0, 0, 0, 0, 0, -1, kTRUE);

  Int_t psmode[6][3] = {0};
  Float_t psratio[6] = {0.f};
  psratio[0] = 100.;

  psmode[0][0] = 333;  // phi
  psmode[0][1] = 2212; // proton
  TVirtualMC::GetMC()->SetDecayMode(9322134,psratio,psmode);
  TVirtualMC::GetMC()->SetDecayMode(9322136,psratio,psmode);

  psmode[0][1] = -2212; // anti-proton
  TVirtualMC::GetMC()->SetDecayMode(-9322134,psratio,psmode);
  TVirtualMC::GetMC()->SetDecayMode(-9322136,psratio,psmode);

  // d*(2380) - dibaryon resonance
  TVirtualMC::GetMC()->DefineParticle( 900010020, "d*_2380", kPTHadron, 2.38, 1.0, 0.94e-23,"Ion", 0.07, 6, 1, 0, 0, 0, 0, 0, 2, kTRUE);
  TVirtualMC::GetMC()->DefineParticle( -900010020, "d*_2380_bar", kPTHadron, 2.38, -1.0, 0.94e-23,"Ion", 0.07, 6, 1, 0, 0, 0, 0, 0, -2, kTRUE);

  Int_t dstmode[6][3] = {0};
  Float_t dstratio[6] = {0.f};
  dstratio[0] = 100; // For now we implement only the mode of interest
                     // d* -> d pi+ pi-
  dstmode[0][0] = 1000010020; // deuteron
  dstmode[0][1] = -211; // negative pion
  dstmode[0][2] = 211; // positive pion
  TVirtualMC::GetMC()->SetDecayMode(900010020,dstratio,dstmode);

  dstmode[0][0] = -1000010020; // anti-deuteron
  TVirtualMC::GetMC()->SetDecayMode(-900010020,dstratio,dstmode);


  // Heavy vector mesons
  // D*+
  TVirtualMC::GetMC()->DefineParticle(413, "D*+", kPTHadron, 2.0103, 1.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // D*-
  TVirtualMC::GetMC()->DefineParticle(-413, "D*-", kPTHadron, 2.0103, -1.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // D*0
  TVirtualMC::GetMC()->DefineParticle(423, "D*0", kPTHadron, 2.0007, 0.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // D*0bar
  TVirtualMC::GetMC()->DefineParticle(-423, "D*0bar", kPTHadron, 2.0007, 0.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // D*_s+
  TVirtualMC::GetMC()->DefineParticle(433, "D*_s+", kPTHadron, 2.1123, 1.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // D*_s-
  TVirtualMC::GetMC()->DefineParticle(-433, "D*_s-", kPTHadron, 2.1123, -1.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // B*0
  TVirtualMC::GetMC()->DefineParticle(513, "B*0", kPTHadron, 5.3251, 0.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // B*0bar
  TVirtualMC::GetMC()->DefineParticle(-513, "B*0bar", kPTHadron, 5.3251, 0.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // B*+
  TVirtualMC::GetMC()->DefineParticle(523, "B*+", kPTHadron, 5.3251, 1.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // B*-
  TVirtualMC::GetMC()->DefineParticle(-523, "B*-", kPTHadron, 5.3251, -1.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // B*_s0
  TVirtualMC::GetMC()->DefineParticle(533, "B*_s0", kPTHadron, 5.4128, 0.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // B*_s0bar
  TVirtualMC::GetMC()->DefineParticle(-533, "B*_s0bar", kPTHadron, 5.4128, 0.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // B*_c+
  TVirtualMC::GetMC()->DefineParticle(543, "B*_c+", kPTHadron, 6.6020, 1.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);
  // B*_c-
  TVirtualMC::GetMC()->DefineParticle(-543, "B*_c-", kPTHadron, 6.6020, -1.0, 0.0,"Hadron", 0.0, 1, -1, 0, 0, 0, 0, 0, 0, kTRUE);

  // Define the 2- and 3-body phase space decay for the Hyper-Triton
  Int_t mode[6][3];
  Float_t bratio[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio[kz] = 0.;
     mode[kz][0] = 0;
     mode[kz][1] = 0;
     mode[kz][2] = 0;
  }
  bratio[0] = 50.;
  mode[0][0] = 1000020030; // Helium3
  mode[0][1] = -211; // negative pion

  bratio[1] = 50.;
  mode[1][0] = 1000010020; // deuteron
  mode[1][1] = 2212; // proton
  mode[1][2] = -211; // negative pion

  TVirtualMC::GetMC()->SetDecayMode(1010010030,bratio,mode);



  // Define the 2- and 3-body phase space decay for the Anti-Hyper-Triton
  Int_t amode[6][3];
  Float_t abratio[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio[kz] = 0.;
     amode[kz][0] = 0;
     amode[kz][1] = 0;
     amode[kz][2] = 0;
  }
  abratio[0] = 50.;
  amode[0][0] = -1000020030; // anti- Helium3
  amode[0][1] = 211; // positive pion
  abratio[1] = 50.;
  amode[1][0] = -1000010020; // anti-deuteron
  amode[1][1] = -2212; // anti-proton
  amode[1][2] = 211; // positive pion

  TVirtualMC::GetMC()->SetDecayMode(-1010010030,abratio,amode);


   // Define the 2- and 3-body phase space decay for the Hyper Hydrogen 4

  Int_t mode3[6][3];
  Float_t bratio3[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio3[kz] = 0.;
     mode3[kz][0] = 0;
     mode3[kz][1] = 0;
     mode3[kz][2] = 0;
  }
  bratio3[0] = 50.;
  mode3[0][0] = 1000020040; // Helium4
  mode3[0][1] = -211; // negative pion

  bratio3[1] = 50.;
  mode3[1][0] = 1000010030; // tritium
  mode3[1][1] = 2212; // proton
  mode3[1][2] = -211; // negative pion

  TVirtualMC::GetMC()->SetDecayMode(1010010040,bratio3,mode3);


  // Define the 2- and 3-body phase space decay for the Hyper Hydrogen 4
  Int_t amode3[6][3];
  Float_t abratio3[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio3[kz] = 0.;
     amode3[kz][0] = 0;
     amode3[kz][1] = 0;
     amode3[kz][2] = 0;
  }
  abratio3[0] = 50.;
  amode3[0][0] = -1000020040; // anti- Helium4
  amode3[0][1] = 211; // positive pion
  abratio3[1] = 50.;
  amode3[1][0] = -1000010030; // anti-tritium
  amode3[1][1] = -2212; // anti-proton
  amode3[1][2] = 211; // positive pion

  TVirtualMC::GetMC()->SetDecayMode(-1010010040,abratio3,amode3);


   // Define the 3-body phase space decay for the Hyper Helium 4
  Int_t mode4[6][3];
  Float_t bratio4[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio4[kz] = 0.;
     mode4[kz][0] = 0;
     mode4[kz][1] = 0;
     mode4[kz][2] = 0;
  }
  bratio4[0] = 100.;
  mode4[0][0] = 1000020030; // Helium3
  mode4[0][1] = -211; // negative pion
  mode4[0][2] = 2212; // proton

  TVirtualMC::GetMC()->SetDecayMode(1010020040,bratio4,mode4);


  // Define the 2-body phase space decay for the Anti-Hyper Helium 4
  Int_t amode4[6][3];
  Float_t abratio4[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio4[kz] = 0.;
     amode4[kz][0] = 0;
     amode4[kz][1] = 0;
     amode4[kz][2] = 0;
  }
  abratio4[0] = 100.;
  amode4[0][0] = -1000020030; // anti-Helium 3
  amode4[0][1] = 211; // positive pion
  amode4[0][2] = -2212; // anti proton

  TVirtualMC::GetMC()->SetDecayMode(-1010020040,abratio4,amode4);

    // Define the 3-body phase space decay for the Hyper Helium 5
    Int_t mode41[6][3];
    Float_t bratio41[6];
    
    for (Int_t kz = 0; kz < 6; kz++) {
        bratio41[kz] = 0.;
        mode41[kz][0] = 0;
        mode41[kz][1] = 0;
        mode41[kz][2] = 0;
    }
    bratio41[0] = 50.;
    mode41[0][0] = 1000020040; // Helium4
    mode41[0][1] = -211; // negative pion
    mode41[0][2] = 2212; // proton
    bratio41[1] = 50.;
    mode41[1][0] = 1000020030; // Helium3
    mode41[1][1] = -211; // negative pion
    mode41[1][2] = 1000010020; // Deuteron
    
    TVirtualMC::GetMC()->SetDecayMode(1010020050,bratio41,mode41);
    
    
    // Define the 2-body phase space decay for the Anti-Hyper Helium 5
    Int_t amode41[6][3];
    Float_t abratio41[6];
    
    for (Int_t kz = 0; kz < 6; kz++) {
        abratio41[kz] = 0.;
        amode41[kz][0] = 0;
        amode41[kz][1] = 0;
        amode41[kz][2] = 0;
    }
    abratio41[0] = 50.;
    amode41[0][0] = -1000020040; // anti-Helium 4
    amode41[0][1] = 211; // positive pion
    amode41[0][2] = -2212; // anti proton
    abratio41[1] = 50.;
    amode41[1][0] = -1000020030; // anti-Helium 3
    amode41[1][1] = 211; // positive pion
    amode41[1][2] = -1000010020; // anti deuteron
    
    TVirtualMC::GetMC()->SetDecayMode(-1010020050,abratio41,amode41);
    
    // Define the 3-body phase space decay for the Double Hyper Hydrogen 4
    Int_t mode42[6][3];
    Float_t bratio42[6];
    
    for (Int_t kz = 0; kz < 6; kz++) {
        bratio42[kz] = 0.;
        mode42[kz][0] = 0;
        mode42[kz][1] = 0;
        mode42[kz][2] = 0;
    }
    bratio42[0] = 100.;
    mode42[0][0] = 1010020040; // Hyper-Helium4
    mode42[0][1] = -211; // negative pion
    
    TVirtualMC::GetMC()->SetDecayMode(1020010040,bratio42,mode42);
    
    
    // Define the 2-body phase space decay for the Anti Double Hyper Hydrogen 4
    Int_t amode42[6][3];
    Float_t abratio42[6];
    
    for (Int_t kz = 0; kz < 6; kz++) {
        abratio42[kz] = 0.;
        amode42[kz][0] = 0;
        amode42[kz][1] = 0;
        amode42[kz][2] = 0;
    }
    abratio42[0] = 100.;
    amode42[0][0] = -1010020040; // anti-Hyper-Helium 4
    amode42[0][1] = 211; // positive pion
    
    TVirtualMC::GetMC()->SetDecayMode(-1020010040,abratio42,amode42);

  // Define the 2-body phase space decay for the Lambda-neutron boundstate
  Int_t mode1[6][3];
  Float_t bratio1[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio1[kz] = 0.;
     mode1[kz][0] = 0;
     mode1[kz][1] = 0;
     mode1[kz][2] = 0;
  }
  bratio1[0] = 100.;
  mode1[0][0] = 1000010020; // deuteron
  mode1[0][1] = -211; // negative pion

  TVirtualMC::GetMC()->SetDecayMode(1010000020,bratio1,mode1);


  // Define the 2-body phase space decay for the Anti-Lambda-neutron boundstate
  Int_t amode1[6][3];
  Float_t abratio1[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio1[kz] = 0.;
     amode1[kz][0] = 0;
     amode1[kz][1] = 0;
     amode1[kz][2] = 0;
  }
  abratio1[0] = 100.;
  amode1[0][0] = -1000010020; // anti-deuteron
  amode1[0][1] = 211; // positive pion

  TVirtualMC::GetMC()->SetDecayMode(-1010000020,abratio1,amode1);

  // Define the 2-body phase space decay for the H-Dibaryon
  Int_t mode2[6][3];
  Float_t bratio2[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio2[kz] = 0.;
     mode2[kz][0] = 0;
     mode2[kz][1] = 0;
     mode2[kz][2] = 0;
  }
  bratio2[0] = 100.;
  mode2[0][0] = 3122; // Lambda
  mode2[0][1] = 2212; // proton
  mode2[0][2] = -211; // negative pion

  TVirtualMC::GetMC()->SetDecayMode(1020000020,bratio2,mode2);

  // Define the 2-body phase space decay for the Anti-H-Dibaryon
  Int_t amode2[6][3];
  Float_t abratio2[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio2[kz] = 0.;
     amode2[kz][0] = 0;
     amode2[kz][1] = 0;
     amode2[kz][2] = 0;
  }
  abratio2[0] = 100.;
  amode2[0][0] = -3122; // anti-deuteron
  amode2[0][1] = -2212; // anti-proton
  amode2[0][2] = 211; // positive pion

  TVirtualMC::GetMC()->SetDecayMode(-1020000020,abratio2,amode2);

  // Define the 2-body phase space decay for the Xi0P
  Int_t mode5[6][3];
  Float_t bratio5[6];

  for (Int_t kz = 0; kz < 6; kz++) {
    bratio5[kz] = 0.;
    mode5[kz][0] = 0;
    mode5[kz][1] = 0;
    mode5[kz][2] = 0;
  }
  bratio5[0] = 100.;
  mode5[0][0] = 3122; // Lambda
  mode5[0][1] = 2212; // proton

  TVirtualMC::GetMC()->SetDecayMode(1020010020,bratio5,mode5);

  // Define the 2-body phase space decay for the Anti-Xi0P
  Int_t amode5[6][3];
  Float_t abratio5[6];

  for (Int_t kz = 0; kz < 6; kz++) {
    abratio5[kz] = 0.;
    amode5[kz][0] = 0;
    amode5[kz][1] = 0;
    amode5[kz][2] = 0;
  }
  abratio5[0] = 100.;
  amode5[0][0] = -3122; // anti-Lambda
  amode5[0][1] = -2212; // anti-proton

  TVirtualMC::GetMC()->SetDecayMode(-1020010020,abratio5,amode5);

  // Define the 2-body phase space decay for the Lambda-Neutron-Neutron
  Int_t mode6[6][3];
  Float_t bratio6[6];

  for (Int_t kz = 0; kz < 6; kz++) {
    bratio6[kz] = 0.;
    mode6[kz][0] = 0;
    mode6[kz][1] = 0;
    mode6[kz][2] = 0;
  }
  bratio6[0] = 100.;
  mode6[0][0] = 1000010030; // triton
  mode6[0][1] = -211; // pion

  TVirtualMC::GetMC()->SetDecayMode(1010000030,bratio6,mode6);

  // Define the 2-body phase space decay for the Anti-Lambda-Neutron-Neutron
  Int_t amode6[6][3];
  Float_t abratio6[6];

  for (Int_t kz = 0; kz < 6; kz++) {
    abratio6[kz] = 0.;
    amode6[kz][0] = 0;
    amode6[kz][1] = 0;
    amode6[kz][2] = 0;
  }
  abratio6[0] = 100.;
  amode6[0][0] = -1000010030; // anti-triton
  amode6[0][1] = 211; // pion

  TVirtualMC::GetMC()->SetDecayMode(-1010000030,abratio6,amode6);


  // Define the 3-body phase space decay for the Omega-Proton
  Int_t mode7[6][3];
  Float_t bratio7[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio7[kz] = 0.;
     mode7[kz][0] = 0;
     mode7[kz][1] = 0;
     mode7[kz][2] = 0;
  }
  bratio7[0] = 100.;
  mode7[0][0] = 3122; // Lambda
  mode7[0][1] = -321; // negative Kaon
  mode7[0][2] = 2212; // proton

  TVirtualMC::GetMC()->SetDecayMode(1030000020,bratio7,mode7);

  // Define the 3-body phase space decay for the Anti-Omega-Proton
  Int_t amode7[6][3];
  Float_t abratio7[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio7[kz] = 0.;
     amode7[kz][0] = 0;
     amode7[kz][1] = 0;
     amode7[kz][2] = 0;
  }
  abratio7[0] = 100.;
  amode7[0][0] = -3122; // anti-Lambda
  amode7[0][1] = 321;   // positive kaon
  amode7[0][2] = -2212; // anti-proton

  TVirtualMC::GetMC()->SetDecayMode(-1030000020,abratio7,amode7);

  // Define the 2-body phase space decay for the Omega-Neutron
  Int_t mode8[6][3];
  Float_t bratio8[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio8[kz] = 0.;
     mode8[kz][0] = 0;
     mode8[kz][1] = 0;
     mode8[kz][2] = 0;
  }
  bratio8[0] = 100.;
  mode8[0][0] = 3122; // Lambda
  mode8[0][1] = 3312; // negative Xi

  TVirtualMC::GetMC()->SetDecayMode(1030010020,bratio8,mode8);

  // Define the 2-body phase space decay for the Anti-Omega-Neutron
  Int_t amode8[6][3];
  Float_t abratio8[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio8[kz] = 0.;
     amode8[kz][0] = 0;
     amode8[kz][1] = 0;
     amode8[kz][2] = 0;
  }
  abratio8[0] = 100.;
  amode8[0][0] = -3122; // anti-Lambda
  amode8[0][1] = -3312; // positive Xi

  TVirtualMC::GetMC()->SetDecayMode(-1030010020,abratio8,amode8);

  // Define the 3-body phase space decay for the Omega-Omega
  Int_t mode9[6][3];
  Float_t bratio9[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio9[kz] = 0.;
     mode9[kz][0] = 0;
     mode9[kz][1] = 0;
     mode9[kz][2] = 0;
  }
  bratio9[0] = 100.;
  mode9[0][0] = 3334; // negative Omega
  mode9[0][1] = 3312; // negative Xi

  TVirtualMC::GetMC()->SetDecayMode(1060020020,bratio9,mode9);

  // Define the 3-body phase space decay for the Anti-Omega-Omega
  Int_t amode9[6][3];
  Float_t abratio9[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio9[kz] = 0.;
     amode9[kz][0] = 0;
     amode9[kz][1] = 0;
     amode9[kz][2] = 0;
  }
  abratio9[0] = 100.;
  amode9[0][0] = -3334; // positive Omega
  amode9[0][1] = -3312; // positive Xi

  TVirtualMC::GetMC()->SetDecayMode(-1060020020,abratio9,amode9);

  // Define the 2- and 3-body phase space decay for the Lambda(1405)-Proton
  Int_t mode10[6][3];
  Float_t bratio10[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio10[kz] = 0.;
     mode10[kz][0] = 0;
     mode10[kz][1] = 0;
     mode10[kz][2] = 0;
  }
  bratio10[0] = 50.;
  mode10[0][0] = 3122; // Lambda
  mode10[0][1] = 2212; // proton
  bratio10[1] = 50.;
  mode10[1][0] = 2212; // proton
  mode10[1][1] = -321; // negative kaon
  mode10[1][2] = 2212; // proton

  TVirtualMC::GetMC()->SetDecayMode(1010010021,bratio10,mode10);

  // Define the 2- and 3-body phase space decay for the Anti-Lambda(1405)-Proton
  Int_t amode10[6][3];
  Float_t abratio10[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio10[kz] = 0.;
     amode10[kz][0] = 0;
     amode10[kz][1] = 0;
     amode10[kz][2] = 0;
  }
  abratio10[0] = 50.;
  amode10[0][0] = -3122; // anti-Lambda
  amode10[0][1] = -2212; // anti-proton
  abratio10[1] = 50.;
  amode10[1][0] = -2212; // anti-proton
  amode10[1][1] = 321;   // positive kaon
  amode10[1][2] = -2212; // anti-proton

  TVirtualMC::GetMC()->SetDecayMode(-1010010021,abratio10,amode10);

  // Define the 3-body phase space decay for the Lambda(1405)-Lambda(1405)
  Int_t mode11[6][3];
  Float_t bratio11[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     bratio11[kz] = 0.;
     mode11[kz][0] = 0;
     mode11[kz][1] = 0;
     mode11[kz][2] = 0;
  }
  bratio11[0] = 50.;
  mode11[0][0] = 3122; // Lambda
  mode11[0][1] = 3122; // Lambda
  bratio11[1] = 50.;
  mode11[1][0] = 3122; // Lambda
  mode11[1][1] = 2212; // proton
  mode11[1][2] = -211; // negative pion

  TVirtualMC::GetMC()->SetDecayMode(1020000021,bratio11,mode11);

  // Define the 3-body phase space decay for the Anti-Lambda(1405)-Lambda(1405)
  Int_t amode11[6][3];
  Float_t abratio11[6];

  for (Int_t kz = 0; kz < 6; kz++) {
     abratio11[kz] = 0.;
     amode11[kz][0] = 0;
     amode11[kz][1] = 0;
     amode11[kz][2] = 0;
  }
  abratio11[0] = 50.;
  amode11[0][0] = -3122; // anti-Lambda
  amode11[0][1] = -3122; // anti-Lambda
  abratio11[1] = 50.;
  amode11[1][0] = -3122; // anti-Lambda
  amode11[1][1] = -2212; // anti-proton
  amode11[1][2] = 211;   // positive pion

  TVirtualMC::GetMC()->SetDecayMode(-1020000021,abratio11,amode11);



  // Define the 2-body phase space decay for the f0(980)
//  Int_t mode[6][3];
//  Float_t bratio[6];

  for (Int_t kz = 0; kz < 6; kz++) {
    bratio[kz] = 0.;
    mode[kz][0] = 0;
    mode[kz][1] = 0;
    mode[kz][2] = 0;
  }
  bratio[0] = 100.;
  mode[0][0] = 211; // pion
  mode[0][1] = -211; // pion

  TVirtualMC::GetMC()->SetDecayMode(9010221,bratio,mode);

    // Define the 2-body phase space decay for the f2(1270)
//  Int_t mode[6][3];
//  Float_t bratio[6];

  for (Int_t kz = 0; kz < 6; kz++) {
    bratio[kz] = 0.;
    mode[kz][0] = 0;
    mode[kz][1] = 0;
    mode[kz][2] = 0;
  }
  bratio[0] = 100.;
  mode[0][0] = 211; // pion
  mode[0][1] = -211; // pion

  TVirtualMC::GetMC()->SetDecayMode(225,bratio,mode);

  // Lambda1520/Lambda1520bar

  TVirtualMC::GetMC()->DefineParticle(3124, "Lambda1520", kPTNeutron, 1.5195 , 0.0, 4.22e-23,"Hadron", 0.0156, 3, -1, 0, 0, 0, 0, 0, 1, kTRUE);
  TVirtualMC::GetMC()->DefineParticle(-3124, "Lambda1520bar", kPTNeutron, 1.5195 , 0.0, 4.22e-23,"Hadron", 0.0156, 3, -1, 0, 0, 0, 0, 0, -1, kTRUE);

  // Lambda1520 decay modes

  // L(1520) -> p K-
  bratio[0] = 0.223547;
  mode[0][0] = 2212;
  mode[0][1] = -321;

  // L(1520) -> n K0
  bratio[1] = 0.223547;
  mode[1][0] = 2112;
  mode[1][1] = -311;

  // L(1520) -> Sigma+ pi-
  bratio[2] = 0.139096;
  mode[2][0] = 3222;
  mode[2][1] = -211;

  // L(1520) -> Sigma0 pi0
  bratio[3] = 0.139096;
  mode[3][0] = 3212;
  mode[3][1] = 111;

  // L(1520) -> Sigma- pi+
  bratio[4] = 0.139096;
  mode[4][0] = 3112;
  mode[4][1] = 211;

  // The other decay modes are neglected
  bratio[5] = 0.;
  mode[5][0] = 0;
  mode[5][1] = 0;

  TVirtualMC::GetMC()->SetDecayMode(3124,bratio,mode);

  // Lambda1520bar decay modes

  // L(1520)bar -> p- K+
  bratio[0] = 0.223547;
  mode[0][0] = -2212;
  mode[0][1] = 321;

  // L(1520)bar -> nbar K0bar
  bratio[1] = 0.223547;
  mode[1][0] = -2112;
  mode[1][1] = 311;

  // L(1520)bar -> Sigmabar- pi+
  bratio[2] = 0.139096;
  mode[2][0] = -3222;
  mode[2][1] = 211;

  // L(1520)bar -> Sigma0bar pi0
  bratio[3] = 0.139096;
  mode[3][0] = -3212;
  mode[3][1] = 111;

  // L(1520)bar -> Sigmabar+ pi-
  bratio[4] = 0.139096;
  mode[4][0] = -3112;
  mode[4][1] = -211;

  // The other decay modes are neglected
  bratio[5] = 0.;
  mode[5][0] = 0;
  mode[5][1] = 0;

  TVirtualMC::GetMC()->SetDecayMode(-3124,bratio,mode);

  // --------------------------------------------------------------------
}

//_______________________________________________________________________
void  AliMC::InitGeometry()
{
  //
  // Initialize detectors
  //

  AliInfo("Initialisation:");
  TStopwatch stw;
  TIter next(gAlice->Modules());
  AliModule *detector;
  while((detector = dynamic_cast<AliModule*>(next()))) {
    stw.Start();
    detector->Init();
    AliInfo(Form("%10s R:%.2fs C:%.2fs",
     detector->GetName(),stw.RealTime(),stw.CpuTime()));
  }
}

//_______________________________________________________________________
void AliMC::SetGeometryFromCDB()
{
  // Set the loading of geometry from cdb instead of creating it
  // A default CDB storage needs to be set before this method is called
  if(AliCDBManager::Instance()->IsDefaultStorageSet() &&
     AliCDBManager::Instance()->GetRun() >= 0)
    AliSimulation::Instance()->SetGeometryFile("*OCDB*");
  else
    AliError("Loading of geometry from CDB ignored. First set a default CDB storage!");
}

//_______________________________________________________________________
Bool_t AliMC::IsGeometryFromCDB() const
{
  return (strcmp(AliSimulation::Instance()->GetGeometryFile(),"*OCDB*")==0);
}

//_______________________________________________________________________
void  AliMC::SetAllAlignableVolumes()
{
  //
  // Add alignable volumes (TGeoPNEntries) looping on all
  // active modules
  //

  AliInfo(Form("Setting entries for all alignable volumes of active detectors"));
  AliModule *detector;
  TIter next(gAlice->Modules());
  while((detector = dynamic_cast<AliModule*>(next()))) {
    detector->AddAlignableVolumes();
  }
}

//_______________________________________________________________________
void  AliMC::GeneratePrimaries()
{
  //
  // Generate primary particles and fill them in the stack.
  //

  Generator()->Generate();
}

//_______________________________________________________________________
void AliMC::SetGenerator(AliGenerator *generator)
{
  //
  // Load the event generator
  //
  if(!fGenerator) fGenerator = generator;
}

//_______________________________________________________________________
void AliMC::ResetGenerator(AliGenerator *generator)
{
  //
  // Load the event generator
  //
  if(fGenerator) {
    if(generator) {
      AliWarning(Form("Replacing generator %s with %s",
          fGenerator->GetName(),generator->GetName()));
    }
    else {
      AliWarning(Form("Replacing generator %s with NULL",
          fGenerator->GetName()));
    }
  }
  fGenerator = generator;
}

//_______________________________________________________________________
void AliMC::FinishRun()
{
  // Clean generator information
  AliDebug(1, "fGenerator->FinishRun()");
  fGenerator->FinishRun();

  // Monitoring information
  if (fMonitor) {
    fMonitor->Print();
    fMonitor->Export("timing.root");
  }

  //Output energy summary tables
  AliDebug(1, "EnergySummary()");
  ToAliDebug(1, EnergySummary());
}

//_______________________________________________________________________
void AliMC::BeginPrimary()
{
  //
  // Called  at the beginning of each primary track
  //

  // Reset Hits info
  ResetHits();
  ResetTrackReferences();
}

//_______________________________________________________________________
void AliMC::PreTrack()
{
  // Actions before the track's transport

     //verbose.PreTrack();

     TObjArray &dets = *gAlice->Modules();
     AliModule *module;

     for (Int_t i = 0; i <= gAlice->GetNdets(); i++)
       if ((module = static_cast<AliModule *>(dets.UncheckedAt(i))))
         module->PreTrack();
}

//_______________________________________________________________________
void AliMC::Stepping()
{
  //
  // Called at every step during transport
  //
  //verbose.Stepping();

  Int_t id = DetFromMate(fMC->CurrentMedium());
  if (id < 0) return;


  if ( fMC->IsNewTrack()            &&
       fMC->TrackTime() == 0.       &&
       fRDecayMin >= 0.             &&
       fRDecayMax > fRDecayMin      &&
       fMC->TrackPid() == fDecayPdg )
  {
      FixParticleDecaytime();
  }

  // --- If monitoring timing was requested, monitor the step
  if (fUseMonitoring) {
    if (!fMonitor) {
      fMonitor = new AliTransportMonitor(fMC->NofVolumes()+1);
      fMonitor->Start();
    }
    if (fMC->IsNewTrack() || fMC->TrackTime() == 0. || fMC->TrackStep()<1.1E-10) {
      fMonitor->DummyStep();
    } else {
    // Normal stepping
      Int_t copy;
      Int_t volId = fMC->CurrentVolID(copy);
      Int_t pdg = fMC->TrackPid();
      TLorentzVector xyz, pxpypz;
      fMC->TrackPosition(xyz);
      fMC->TrackMomentum(pxpypz);
      fMonitor->StepInfo(volId, pdg, pxpypz.E(), xyz.X(), xyz.Y(), xyz.Z());
    }
  }
  //
  // --- If lego option, do it and leave
  if (AliSimulation::Instance()->Lego())
    AliSimulation::Instance()->Lego()->StepManager();
  else {
    Int_t copy;
    //Update energy deposition tables
    AddEnergyDeposit(fMC->CurrentVolID(copy),fMC->Edep());
    //
    // write tracke reference for track which is dissapearing - MI

    if (fMC->IsTrackDisappeared() && !(fMC->IsTrackAlive())) {
    if (fMC->Etot() > 0.05) AddTrackReference(GetCurrentTrackNumber(),
            AliTrackReference::kDisappeared);


    }

    //Call the appropriate stepping routine;
    AliModule *det = static_cast<AliModule*>(gAlice->Modules()->UncheckedAt(id));
    if(det && det->StepManagerIsEnabled()) {
      det->StepManager();
    }
  }
}

//_______________________________________________________________________
void AliMC::EnergySummary()
{
  //e
  // Print summary of deposited energy
  //

  Int_t ndep=0;
  Float_t edtot=0;
  Float_t ed, ed2;
  Int_t kn, i, left, j, id;
  const Float_t kzero=0;
  Int_t ievent=AliRunLoader::Instance()->GetHeader()->GetEvent()+1;
  //
  // Energy loss information
  if(ievent) {
    printf("***************** Energy Loss Information per event (GEV) *****************\n");
    for(kn=1;kn<fEventEnergy.GetSize();kn++) {
      ed=fSummEnergy[kn];
      if(ed>0) {
  fEventEnergy[ndep]=kn;
  if(ievent>1) {
    ed=ed/ievent;
    ed2=fSum2Energy[kn];
    ed2=ed2/ievent;
    ed2=100*TMath::Sqrt(TMath::Max(ed2-ed*ed,kzero))/ed;
  } else
    ed2=99;
  fSummEnergy[ndep]=ed;
  fSum2Energy[ndep]=TMath::Min(static_cast<Float_t>(99.),TMath::Max(ed2,kzero));
  edtot+=ed;
  ndep++;
      }
    }
    for(kn=0;kn<(ndep-1)/3+1;kn++) {
      left=ndep-kn*3;
      for(i=0;i<(3<left?3:left);i++) {
  j=kn*3+i;
        id=Int_t (fEventEnergy[j]+0.1);
  printf(" %s %10.3f +- %10.3f%%;",TVirtualMC::GetMC()->VolName(id),fSummEnergy[j],fSum2Energy[j]);
      }
      printf("\n");
    }
    //
    // Relative energy loss in different detectors
    printf("******************** Relative Energy Loss per event ********************\n");
    printf("Total energy loss per event %10.3f GeV\n",edtot);
    for(kn=0;kn<(ndep-1)/5+1;kn++) {
      left=ndep-kn*5;
      for(i=0;i<(5<left?5:left);i++) {
  j=kn*5+i;
        id=Int_t (fEventEnergy[j]+0.1);
  printf(" %s %10.3f%%;",TVirtualMC::GetMC()->VolName(id),100*fSummEnergy[j]/edtot);
      }
      printf("\n");
    }
    for(kn=0;kn<75;kn++) printf("*");
    printf("\n");
  }
  //
  // Reset the TArray's
  //  fEventEnergy.Set(0);
  //  fSummEnergy.Set(0);
  //  fSum2Energy.Set(0);
}
#include <TFile.h>
//_____________________________________________________________________________
void AliMC::BeginEvent()
{
  //
  // Clean-up previous event
  // Energy scores
  AliDebug(1, ">>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>");
  AliDebug(1, ">>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>");
  AliDebug(1, ">>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>");
  AliDebug(1, "          BEGINNING EVENT               ");
  AliDebug(1, ">>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>");
  AliDebug(1, ">>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>");
  AliDebug(1, ">>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>");

  AliRunLoader *runloader=AliRunLoader::Instance();

  /*******************************/
  /*   Clean after eventual      */
  /*   previous event            */
  /*******************************/


  //Set the next event in Run Loader -> Cleans trees (TreeK and all trees in detectors),
  gAlice->SetEventNrInRun(gAlice->GetEventNrInRun()+1);
  runloader->SetEventNumber(gAlice->GetEventNrInRun());// sets new files, cleans the previous event stuff, if necessary, etc.,
  AliDebug(1, Form("EventNr is %d",gAlice->GetEventNrInRun()));

  fEventEnergy.Reset();
    // Clean detector information

  if (runloader->Stack())
      runloader->Stack()->Reset();//clean stack -> tree is unloaded
  else
      runloader->MakeStack();//or make a new one

  // Random engine status
  //

  if ( fSaveRndmStatus || fSaveRndmEventStatus) {
    TString fileName="random";
    if ( fSaveRndmEventStatus ) {
      fileName += "Evt";
      fileName += gAlice->GetEventNrInRun();
    }
    fileName += ".root";

    // write ROOT random engine status
    cout << "Saving random engine status in " << fileName.Data() << endl;
    TFile f(fileName.Data(),"RECREATE");
    gRandom->Write(fileName.Data());
  }

  if ( fReadRndmStatus ) {
    //read ROOT random engine status
    cout << "Reading random engine status from " << fRndmFileName.Data() << endl;
    TFile f(fRndmFileName.Data());
    gRandom->Read(fRndmFileName.Data());
  }

  if(AliSimulation::Instance()->Lego() == 0x0)
  {
      AliDebug(1, "fRunLoader->MakeTree(K)");
      runloader->MakeTree("K");
  }

  AliDebug(1, "TVirtualMC::GetMC()->SetStack(fRunLoader->Stack())");
  TVirtualMC::GetMC()->SetStack(runloader->Stack());//Was in InitMC - but was moved here
                                     //because we don't have guarantee that
                                     //stack pointer is not going to change from event to event
                   //since it bellobgs to header and is obtained via RunLoader
  //
  //  Reset all Detectors & kinematics & make/reset trees
  //

  runloader->GetHeader()->Reset(AliCDBManager::Instance()->GetRun(),gAlice->GetEvNumber(),
        gAlice->GetEventNrInRun());
//  fRunLoader->WriteKinematics("OVERWRITE");  is there any reason to rewrite here since MakeTree does so

  if(AliSimulation::Instance()->Lego())
  {
      AliSimulation::Instance()->Lego()->BeginEvent();
      return;
  }


  AliDebug(1, "ResetHits()");
  ResetHits();

  AliDebug(1, "fRunLoader->MakeTree(H)");
  runloader->MakeTree("H");



  MakeTmpTrackRefsTree();
  //create new branches and SetAdresses
  TIter next(gAlice->Modules());
  AliModule *detector;
  while((detector = (AliModule*)next()))
   {
       AliDebug(2, Form("%s->MakeBranch(H)",detector->GetName()));
       detector->MakeBranch("H");
   }
}

//_______________________________________________________________________
void AliMC::ResetHits()
{
  //
  //  Reset all Detectors hits
  //
  TIter next(gAlice->Modules());
  AliModule *detector;
  while((detector = dynamic_cast<AliModule*>(next()))) {
     detector->ResetHits();
  }
}

//_______________________________________________________________________
void AliMC::ResetDigits()
{
  //
  //  Reset all Detectors digits
  //
  TIter next(gAlice->Modules());
  AliModule *detector;
  while((detector = dynamic_cast<AliModule*>(next()))) {
     detector->ResetDigits();
  }
}

//_______________________________________________________________________
void AliMC::ResetSDigits()
{
  //
  //  Reset all Detectors digits
  //
  TIter next(gAlice->Modules());
  AliModule *detector;
  while((detector = dynamic_cast<AliModule*>(next()))) {
     detector->ResetSDigits();
  }
}

//_______________________________________________________________________
void AliMC::PostTrack()
{
  // Posts tracks for each module

  TObjArray &dets = *gAlice->Modules();
  AliModule *module;

  for(Int_t i=0; i<=gAlice->GetNdets(); i++)
    if((module = static_cast<AliModule*>(dets.UncheckedAt(i))))
      module->PostTrack();
}

//_______________________________________________________________________
void AliMC::FinishPrimary()
{
  //
  // Called  at the end of each primary track
  //

  AliRunLoader *runloader=AliRunLoader::Instance();
  //  static Int_t count=0;
  //  const Int_t times=10;
  // This primary is finished, purify stack
#if ROOT_VERSION_CODE > 262152
  if (!(TVirtualMC::GetMC()->SecondariesAreOrdered())) {
      if (runloader->Stack()->ReorderKine()) RemapHits();
  }
#endif
  if (runloader->Stack()->PurifyKine(fPuRmax, fPuZmax)) RemapHits();

  TIter next(gAlice->Modules());
  AliModule *detector;
  while((detector = dynamic_cast<AliModule*>(next()))) {
    detector->FinishPrimary();
    AliLoader* loader = detector->GetLoader();
    if(loader)
     {
       TTree* treeH = loader->TreeH();
       if (treeH) treeH->Fill(); //can be Lego run and treeH can not exist
     }
  }

  // Write out track references if any
  if (fTmpTreeTR) fTmpTreeTR->Fill();
}

void AliMC::RemapHits()
{
//
// Remaps the track labels of the hits
    AliRunLoader *runloader=AliRunLoader::Instance();
    AliStack* stack = runloader->Stack();
    TList* hitLists = GetHitLists();
    TIter next(hitLists);
    TCollection *hitList;

    while((hitList = dynamic_cast<TCollection*>(next()))) {
  TIter nexthit(hitList);
  AliHit *hit;
  while((hit = dynamic_cast<AliHit*>(nexthit()))) {
      hit->SetTrack(stack->TrackLabel(hit->GetTrack()));
  }
    }

    //
    // This for detectors which have a special mapping mechanism
    // for hits, such as TPC and TRD
    //


    TObjArray* modules = gAlice->Modules();
    TIter nextmod(modules);
    AliModule *module;
    while((module = (AliModule*) nextmod())) {
  AliDetector* det = dynamic_cast<AliDetector*> (module);
  if (det) det->RemapTrackHitIDs(stack->TrackLabelMap());
    }
    //
    RemapTrackReferencesIDs(stack->TrackLabelMap());
}

//_______________________________________________________________________
void AliMC::FinishEvent()
{
  //
  // Called at the end of the event.
  //

  if(AliSimulation::Instance()->Lego()) AliSimulation::Instance()->Lego()->FinishEvent();

  TIter next(gAlice->Modules());
  AliModule *detector;
  while((detector = dynamic_cast<AliModule*>(next()))) {
    detector->FinishEvent();
  }

  //Update the energy deposit tables
  Int_t i;
  for(i=0;i<fEventEnergy.GetSize();i++)
   {
    fSummEnergy[i]+=fEventEnergy[i];
    fSum2Energy[i]+=fEventEnergy[i]*fEventEnergy[i];
   }

  AliRunLoader *runloader=AliRunLoader::Instance();

  AliHeader* header = runloader->GetHeader();
  AliStack* stack = runloader->Stack();
  if ( (header == 0x0) || (stack == 0x0) )
   {//check if we got header and stack. If not cry and exit aliroot
    AliFatal("Can not get the stack or header from LOADER");
    return;//never reached
   }
  // Update Header information
  header->SetNprimary(stack->GetNprimary());
  header->SetNtrack(stack->GetNtrack());
  header->SetTimeStamp(AliSimulation::Instance()->GenerateTimeStamp());
  header->SetSgPerBgEmbedded(gAlice->GetSgPerBgEmbedded());
  // Write out the kinematics
  if (!AliSimulation::Instance()->Lego()) stack->FinishEvent();

  // Synchronize the TreeTR with TreeK
  if (fTmpTreeTR) ReorderAndExpandTreeTR();

  // Write out the event Header information
  TTree* treeE = runloader->TreeE();
  if (treeE)
   {
      header->SetStack(stack);
      treeE->Fill();
   }
  else
   {
    AliError("Can not get TreeE from RL");
   }

  if(AliSimulation::Instance()->Lego() == 0x0)
   {
     runloader->WriteKinematics("OVERWRITE");
     runloader->WriteTrackRefs("OVERWRITE");
     runloader->WriteHits("OVERWRITE");
   }

  AliDebug(1, "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<");
  AliDebug(1, "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<");
  AliDebug(1, "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<");
  AliDebug(1, "          FINISHING EVENT               ");
  AliDebug(1, "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<");
  AliDebug(1, "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<");
  AliDebug(1, "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<");
}

//_______________________________________________________________________
void AliMC::Init()
{
  // MC initialization


   //=================Create Materials and geometry
   TVirtualMC::GetMC()->Init();
  // Set alignable volumes for the whole geometry (with old root)
#if ROOT_VERSION_CODE < 331527
  SetAllAlignableVolumes();
#endif
   //Read the cuts for all materials
   ReadTransPar();
   //Build the special IMEDIA table
   MediaTable();

   //Compute cross-sections
   TVirtualMC::GetMC()->BuildPhysics();

   //Initialise geometry deposition table
   fEventEnergy.Set(TVirtualMC::GetMC()->NofVolumes()+1);
   fSummEnergy.Set(TVirtualMC::GetMC()->NofVolumes()+1);
   fSum2Energy.Set(TVirtualMC::GetMC()->NofVolumes()+1);

   // Register MC in configuration
   AliConfig::Instance()->Add(TVirtualMC::GetMC());

   // cache the VMC pointer/instance
   CacheVMCInstance();
}

//_______________________________________________________________________
void AliMC::MediaTable()
{
  //
  // Built media table to get from the media number to
  // the detector id
  //

  Int_t kz, nz, idt, lz, i, k, ind;
  //  Int_t ibeg;
  TObjArray &dets = *gAlice->Detectors();
  AliModule *det;
  Int_t ndets=gAlice->GetNdets();
  //
  // For all detectors
  for (kz=0;kz<ndets;kz++) {
    // If detector is defined
    if((det=dynamic_cast<AliModule*>(dets[kz]))) {
        TArrayI &idtmed = *(det->GetIdtmed());
        for(nz=0;nz<100;nz++) {

  // Find max and min material number
  if((idt=idtmed[nz])) {
    det->LoMedium() = det->LoMedium() < idt ? det->LoMedium() : idt;
    det->HiMedium() = det->HiMedium() > idt ? det->HiMedium() : idt;
  }
      }
      if(det->LoMedium() > det->HiMedium()) {
  det->LoMedium() = 0;
  det->HiMedium() = 0;
      } else {
  if(det->HiMedium() > fImedia->GetSize()) {
    AliError(Form("Increase fImedia from %d to %d",
      fImedia->GetSize(),det->HiMedium()));
    return;
  }
  // Tag all materials in rage as belonging to detector kz
  for(lz=det->LoMedium(); lz<= det->HiMedium(); lz++) {
    (*fImedia)[lz]=kz;
  }
      }
    }
  }
  //
  // Print summary table
  AliInfo("Tracking media ranges:");
  ToAliInfo(
  for(i=0;i<(ndets-1)/6+1;i++) {
    for(k=0;k< (6<ndets-i*6?6:ndets-i*6);k++) {
      ind=i*6+k;
      det=dynamic_cast<AliModule*>(dets[ind]);
      if(det)
  printf(" %6s: %3d -> %3d;",det->GetName(),det->LoMedium(),
         det->HiMedium());
      else
  printf(" %6s: %3d -> %3d;","NULL",0,0);
    }
    printf("\n");
  }
      );
}

//_______________________________________________________________________
void AliMC::ReadTransPar()
{
  //
  // Read filename to set the transport parameters
  //


  const Int_t kncuts=10;
  const Int_t knflags=12;
  const Int_t knpars=kncuts+knflags;
  const char kpars[knpars][7] = {"CUTGAM" ,"CUTELE","CUTNEU","CUTHAD","CUTMUO",
             "BCUTE","BCUTM","DCUTE","DCUTM","PPCUTM","ANNI",
             "BREM","COMP","DCAY","DRAY","HADR","LOSS",
             "MULS","PAIR","PHOT","RAYL","STRA"};
  char line[256];
  char detName[7];
  char* filtmp;
  Float_t cut[kncuts];
  Int_t flag[knflags];
  Int_t i, itmed, iret, jret, ktmed, kz;
  FILE *lun;
  //
  // See whether the file is there
  filtmp=gSystem->ExpandPathName(fTransParName.Data());
  lun=fopen(filtmp,"r");
  delete [] filtmp;
  if(!lun) {
    AliWarning(Form("File %s does not exist!",fTransParName.Data()));
    return;
  }
  //
  while(1) {
    // Initialise cuts and flags
    for(i=0;i<kncuts;i++) cut[i]=-99;
    for(i=0;i<knflags;i++) flag[i]=-99;
    itmed=0;
    memset(line,0,256);
    // Read up to the end of line excluded
    iret=fscanf(lun,"%255[^\n]",line);
    if(iret<0) {
      //End of file
      fclose(lun);
      return;
    }
    // Read the end of line
    jret = fscanf(lun,"%*c");
    if(!iret) continue;
    if(line[0]=='*') continue;
    // Read the numbers
    iret=sscanf(line,"%6s %d %f %f %f %f %f %f %f %f %f %f %d %d %d %d %d %d %d %d %d %d %d %d",
    detName,&itmed,&cut[0],&cut[1],&cut[2],&cut[3],&cut[4],&cut[5],&cut[6],&cut[7],&cut[8],
    &cut[9],&flag[0],&flag[1],&flag[2],&flag[3],&flag[4],&flag[5],&flag[6],&flag[7],
    &flag[8],&flag[9],&flag[10],&flag[11]);
    if(!iret) continue;
    if(iret<0) {
      //reading error
      AliWarning(Form("Error reading file %s",fTransParName.Data()));
      continue;
    }
    // Check that the module exist
    AliModule *mod = gAlice->GetModule(detName);
    if(mod) {
      // Get the array of media numbers
      TArrayI &idtmed = *mod->GetIdtmed();
      // Check that the tracking medium code is valid
      if(0<=itmed && itmed < 100) {
  ktmed=idtmed[itmed];
  if(!ktmed) {
    AliWarning(Form("Invalid tracking medium code %d for %s",itmed,mod->GetName()));
    continue;
  }
  // Set energy thresholds
  for(kz=0;kz<kncuts;kz++) {
    if(cut[kz]>=0) {
      AliDebug(2, Form("%-6s set to %10.3E for tracking medium code %4d for %s",
           kpars[kz],cut[kz],itmed,mod->GetName()));
      TVirtualMC::GetMC()->Gstpar(ktmed,kpars[kz],cut[kz]);
    }
  }
  // Set transport mechanisms
  for(kz=0;kz<knflags;kz++) {
    if(flag[kz]>=0) {
      AliDebug(2, Form("%-6s set to %10d for tracking medium code %4d for %s",
           kpars[kncuts+kz],flag[kz],itmed,mod->GetName()));
      TVirtualMC::GetMC()->Gstpar(ktmed,kpars[kncuts+kz],Float_t(flag[kz]));
    }
  }
      } else {
  AliWarning(Form("Invalid medium code %d",itmed));
  continue;
      }
    } else {
      AliDebug(1, Form("%s not present",detName));
      continue;
    }
  }
}

//_______________________________________________________________________
void AliMC::SetTransPar(const char *filename)
{
  //
  // Sets the file name for transport parameters
  //
  fTransParName = filename;
}

//_______________________________________________________________________
void AliMC::AddHit(Int_t id, Int_t track, Int_t *vol, Float_t *hits) const
{
  //
  //  Add a hit to detector id
  //
  TObjArray &dets = *gAlice->Modules();
  if(dets[id]) static_cast<AliModule*>(dets[id])->AddHit(track,vol,hits);
}

//_______________________________________________________________________
void AliMC::AddDigit(Int_t id, Int_t *tracks, Int_t *digits) const
{
  //
  // Add digit to detector id
  //
  TObjArray &dets = *gAlice->Modules();
  if(dets[id]) static_cast<AliModule*>(dets[id])->AddDigit(tracks,digits);
}

//_______________________________________________________________________
Int_t AliMC::GetCurrentTrackNumber() const {
  //
  // Returns current track
  //
  return AliRunLoader::Instance()->Stack()->GetCurrentTrackNumber();
}

//_______________________________________________________________________
void AliMC::DumpPart (Int_t i) const
{
  //
  // Dumps particle i in the stack
  //
  AliRunLoader * runloader = AliRunLoader::Instance();
   if (runloader->Stack())
    runloader->Stack()->DumpPart(i);
}

//_______________________________________________________________________
void AliMC::DumpPStack () const
{
  //
  // Dumps the particle stack
  //
  AliRunLoader * runloader = AliRunLoader::Instance();
   if (runloader->Stack())
    runloader->Stack()->DumpPStack();
}

//_______________________________________________________________________
Int_t AliMC::GetNtrack() const {
  //
  // Returns number of tracks in stack
  //
  Int_t ntracks = -1;
  AliRunLoader * runloader = AliRunLoader::Instance();
   if (runloader->Stack())
     ntracks = runloader->Stack()->GetNtrack();
   return ntracks;
}

//_______________________________________________________________________
Int_t AliMC::GetPrimary(Int_t track) const
{
  //
  // return number of primary that has generated track
  //
  Int_t nprimary = -999;
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader->Stack())
    nprimary = runloader->Stack()->GetPrimary(track);
  return nprimary;
}

//_______________________________________________________________________
TParticle* AliMC::Particle(Int_t i) const
{
  // Returns the i-th particle from the stack taking into account
  // the remaping done by PurifyKine
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader)
   if (runloader->Stack())
    return runloader->Stack()->Particle(i);
  return 0x0;
}

//_______________________________________________________________________
const TObjArray* AliMC::Particles() const {
  //
  // Returns pointer to Particles array
  //
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader)
   if (runloader->Stack())
    return runloader->Stack()->Particles();
  return 0x0;
}

//_______________________________________________________________________
void AliMC::PushTrack(Int_t done, Int_t parent, Int_t pdg, const Float_t *pmom,
                      const Float_t *vpos, const Float_t *polar, Float_t tof,
                      TMCProcess mech, Int_t &ntr, Float_t weight, Int_t is) const
{
// Delegate to stack
//
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader)
    if (runloader->Stack())
      runloader->Stack()->PushTrack(done, parent, pdg, pmom, vpos, polar, tof,
            mech, ntr, weight, is);
}

//_______________________________________________________________________
void AliMC::PushTrack(Int_t done, Int_t parent, Int_t pdg,
                  Double_t px, Double_t py, Double_t pz, Double_t e,
            Double_t vx, Double_t vy, Double_t vz, Double_t tof,
          Double_t polx, Double_t poly, Double_t polz,
          TMCProcess mech, Int_t &ntr, Float_t weight, Int_t is) const
{
  // Delegate to stack
  //
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader)
    if (runloader->Stack())
      runloader->Stack()->PushTrack(done, parent, pdg, px, py, pz, e, vx, vy, vz, tof,
            polx, poly, polz, mech, ntr, weight, is);
}

//_______________________________________________________________________
void AliMC::SetHighWaterMark(Int_t nt) const
{
    //
    // Set high water mark for last track in event
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader)
    if (runloader->Stack())
      runloader->Stack()->SetHighWaterMark(nt);
}

//_______________________________________________________________________
void AliMC::KeepTrack(Int_t track) const
{
  //
  // Delegate to stack
  //
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader)
    if (runloader->Stack())
      runloader->Stack()->KeepTrack(track);
}

//_______________________________________________________________________
void AliMC::FlagTrack(Int_t track) const
{
  // Delegate to stack
  //
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader)
    if (runloader->Stack())
      runloader->Stack()->FlagTrack(track);
}

//_______________________________________________________________________
void AliMC::SetCurrentTrack(Int_t track) const
{
  //
  // Set current track number
  //
  AliRunLoader * runloader = AliRunLoader::Instance();
  if (runloader)
    if (runloader->Stack())
      runloader->Stack()->SetCurrentTrack(track);
}

//_______________________________________________________________________
AliTrackReference*  AliMC::AddTrackReference(Int_t label, Int_t id)
{
  //
  // add a trackrefernce to the list
  Int_t primary = GetPrimary(label);
  Particle(primary)->SetBit(kKeepBit);

  Int_t nref = fTmpTrackReferences.GetEntriesFast();
  return new(fTmpTrackReferences[nref]) AliTrackReference(label, id);
}



//_______________________________________________________________________
void AliMC::ResetTrackReferences()
{
  //
  //  Reset all  references
  //
    fTmpTrackReferences.Clear();
}

//_______________________________________________________________________
void AliMC::RemapTrackReferencesIDs(const Int_t *map)
{
  //
  // Remapping track reference
  // Called at finish primary
  //

  Int_t nEntries = fTmpTrackReferences.GetEntries();
  for (Int_t i=0; i < nEntries; i++){
      AliTrackReference * ref = dynamic_cast<AliTrackReference*>(fTmpTrackReferences.UncheckedAt(i));
      if (ref) {
    Int_t newID = map[ref->GetTrack()];
    if (newID>=0) ref->SetTrack(newID);
    else {
        ref->SetBit(kNotDeleted,kFALSE);
        fTmpTrackReferences.RemoveAt(i);
    }
      } // if ref
  }
  fTmpTrackReferences.Compress();
}

//_______________________________________________________________________
void AliMC::FixParticleDecaytime()
{
    //
    // Fix the particle decay time according to rmin and rmax for decays
    //

    TLorentzVector p;
    TVirtualMC::GetMC()->TrackMomentum(p);
    Double_t tmin, tmax;
    Double_t b;

    // Transverse velocity
    Double_t vt    = p.Pt() / p.E();

    if ((b = ((AliMagF*)TGeoGlobalMagField::Instance()->GetField())->SolenoidField()) > 0.) {     // [kG]

  // Radius of helix

  Double_t rho   = p.Pt() / 0.0003 / b; // [cm]

  // Revolution frequency

  Double_t omega = vt / rho;

  // Maximum and minimum decay time
  //
  // Check for curlers first
  const Double_t kOvRhoSqr2 = 1./(rho*TMath::Sqrt(2.));
  if (fRDecayMax * kOvRhoSqr2 > 1.) return;

  //

  tmax  = TMath::ACos((1.-fRDecayMax*kOvRhoSqr2)*(1.+fRDecayMax*kOvRhoSqr2)) / omega;   // [ct]
  tmin  = TMath::ACos((1.-fRDecayMin*kOvRhoSqr2)*(1.+fRDecayMin*kOvRhoSqr2)) / omega;   // [ct]
    } else {
  tmax =  fRDecayMax / vt;                                                      // [ct]
  tmin =  fRDecayMin / vt;                                                // [ct]
    }

    //
    // Dial t using the two limits
    Double_t t = tmin + (tmax - tmin) * gRandom->Rndm();                              // [ct]
    //
    //
    // Force decay time in transport code
    //
    TVirtualMC::GetMC()->ForceDecayTime(t / 2.99792458e10);
}

void AliMC::MakeTmpTrackRefsTree()
{
    // Make the temporary track reference tree
    fTmpFileTR = new TFile("TrackRefsTmp.root", "recreate");
    fTmpTreeTR = new TTree("TreeTR", "Track References");
    TClonesArray* pRef = &fTmpTrackReferences;
    fTmpTreeTR->Branch("TrackReferences", &pRef, 4000);
}

//_______________________________________________________________________
void AliMC::ReorderAndExpandTreeTR()
{
//
//  Reorder and expand the temporary track reference tree in order to match the kinematics tree
//

    AliRunLoader *rl = AliRunLoader::Instance();
//
//  TreeTR
    AliDebug(1, "fRunLoader->MakeTrackRefsContainer()");
    rl->MakeTrackRefsContainer();
    TTree * treeTR = rl->TreeTR();
  // make branch for central track references
  TClonesArray* pRef = &fTrackReferences;
  treeTR->Branch("TrackReferences", &pRef);

    AliStack* stack  = rl->Stack();
    Int_t np = stack->GetNprimary();
    Int_t nt = fTmpTreeTR->GetEntries();
    //
    // Loop over tracks and find the secondaries with the help of the kine tree
    Int_t ifills = 0;
    Int_t it = 0;
    for (Int_t ip = np - 1; ip > -1; ip--) {
  TParticle *part = stack->Particle(ip);
  //printf("Particle %5d %5d %5d %5d %5d \n", ip, part->GetPdgCode(), part->GetFirstMother(), part->GetFirstDaughter(), part->GetLastDaughter());

  // Skip primaries that have not been transported
  Int_t dau1  = part->GetFirstDaughter();
  Int_t dau2  = -1;
  if (!part->TestBit(kTransportBit)) continue;
  //
  fTmpTreeTR->GetEntry(it++);
  Int_t nh = fTmpTrackReferences.GetEntries();
  // Determine range of secondaries produced by this primary
  if (dau1 > -1) {
      Int_t inext = ip - 1;
      while (dau2 < 0) {
    if (inext >= 0) {
        part = stack->Particle(inext);
        dau2 =  part->GetFirstDaughter();
        if (!(part->TestBit(kTransportBit)) || dau2 == -1 || dau2 < np) {
//        if (dau2 == -1 || dau2 < np) {
      dau2 = -1;
        } else {
      dau2--;
        }
    } else {
        dau2 = stack->GetNtrack() - 1;
    }
    inext--;
      } // find upper bound
  }  // dau2 < 0
//  printf("Check (1) %5d %5d %5d %5d %5d \n", ip, np, it, dau1, dau2);
  //
  // Loop over reference hits and find secondary label
  for (Int_t id = dau1; (id <= dau2) && (dau1 > -1); id++) {
      for (Int_t ih = 0; ih < nh; ih++) {
    AliTrackReference* tr = (AliTrackReference*) fTmpTrackReferences.At(ih);
    Int_t label = tr->Label();
    // Skip primaries
    if (label == ip) continue;
    if (label > dau2 || label < dau1)
        AliWarning(Form("Track Reference Label out of range !: %5d %5d %5d \n", label, dau1, dau2));
    if (label == id) {
        // secondary found
        Int_t nref =  fTrackReferences.GetEntriesFast();
        new(fTrackReferences[nref]) AliTrackReference(*tr);
    }
      } // hits
      treeTR->Fill();
      fTrackReferences.Clear();
      ifills++;
  } // daughters
    } // tracks
    //
    // Now loop again and write the primaries
    it = nt - 1;
    for (Int_t ip = 0; ip < np; ip++) {
  TParticle* part = stack->Particle(ip);
//  if ((part->GetFirstDaughter() == -1 && part->GetStatusCode() <= 1) || part->GetFirstDaughter() >= np)
  if (part->TestBit(kTransportBit))
  {
      // Skip particles that have not been transported
      fTmpTreeTR->GetEntry(it--);
      Int_t nh = fTmpTrackReferences.GetEntries();
      //
      // Loop over reference hits and find primary labels
      for (Int_t ih = 0; ih < nh; ih++) {
    AliTrackReference* tr = (AliTrackReference*)  fTmpTrackReferences.At(ih);
    Int_t label = tr->Label();
    if (label == ip) {
        Int_t nref = fTrackReferences.GetEntriesFast();
        new(fTrackReferences[nref]) AliTrackReference(*tr);
    }
      }
  }
  treeTR->Fill();
  fTrackReferences.Clear();
  ifills++;
    } // tracks
    // Check
    if (ifills != stack->GetNtrack())
  AliWarning(Form("Number of entries in TreeTR (%5d) unequal to TreeK (%5d) \n", ifills, stack->GetNtrack()));
//
//  Clean-up
    delete fTmpTreeTR;
    fTmpFileTR->Close();
    delete fTmpFileTR;
    fTmpTrackReferences.Clear();
    AliFileUtilities::RemoveLocalFile("TrackRefsTmp.root");
}