TPC calibration base class for one ROC. More...

#include <AliTPCCalROC.h>

Inheritance diagram for AliTPCCalROC:

Public Types
enum	EStatType { kMean =0, kMedian =1, kRMS =2, kMinElement =3, kMaxElement =4 }

enum	EPadType { kAll =0, kOROCmedium =1, kOROClong =2 }

Public Member Functions
	AliTPCCalROC ()

	AliTPCCalROC (UInt_t sector)

	AliTPCCalROC (const AliTPCCalROC &c)

AliTPCCalROC &	operator= (const AliTPCCalROC &param)

virtual	~AliTPCCalROC ()

virtual void	Print (Option_t *option="") const

UInt_t	GetSector () const

UInt_t	GetNrows () const

UInt_t	GetNchannels () const

UInt_t	GetNchannelsMedium () const

Bool_t	IsInRange (UInt_t row, UInt_t pad)

UInt_t	GetNPads (UInt_t row) const

Float_t	GetValue (UInt_t row, UInt_t pad) const

Float_t	GetValue (UInt_t channel) const

void	SetValue (UInt_t row, UInt_t pad, Float_t vd)

void	SetValue (UInt_t channel, Float_t vd)

void	Reset ()

virtual void	Draw (Option_t *option="")

Bool_t	MedianFilter (Int_t deltaRow, Int_t deltaPad, AliTPCCalROC *outlierROC=0, Bool_t doEdge=kTRUE)

Bool_t	LTMFilter (Int_t deltaRow, Int_t deltaPad, Float_t fraction, Int_t type, AliTPCCalROC *outlierROC=0, Bool_t doEdge=kTRUE)

Bool_t	Convolute (Double_t sigmaPad, Double_t sigmaRow, AliTPCCalROC outlierPad=0, TF1 fpad=0, TF1 *frow=0)

void	Add (Float_t c1)

void	Multiply (Float_t c1)

void	Add (const AliTPCCalROC *roc, Double_t c1=1)

void	Multiply (const AliTPCCalROC *roc)

void	Divide (const AliTPCCalROC *roc)

Double_t	GetStats (EStatType statType, AliTPCCalROC *const outlierROC=0, EPadType padType=kAll) const

Double_t	GetMean (AliTPCCalROC *const outlierROC=0, EPadType padType=kAll) const

Double_t	GetRMS (AliTPCCalROC *const outlierROC=0, EPadType padType=kAll) const

Double_t	GetMedian (AliTPCCalROC *const outlierROC=0, EPadType padType=kAll) const

Double_t	GetMinElement (AliTPCCalROC *const outlierROC=0, EPadType padType=kAll) const

Double_t	GetMaxElement (AliTPCCalROC *const outlierROC=0, EPadType padType=kAll) const

Double_t	GetLTM (Double_t const sigma=0, Double_t fraction=0.9, AliTPCCalROC const outlierROC=0, EPadType padType=kAll)

TH1F *	MakeHisto1D (Float_t min=4, Float_t max=-4, Int_t type=0)

TH2F *	MakeHisto2D (Float_t min=4, Float_t max=-4, Int_t type=0)

TH2F *	MakeHistoOutliers (Float_t delta=4, Float_t fraction=0.7, Int_t mode=0)

AliTPCCalROC *	LocalFit (Int_t rowRadius, Int_t padRadius, AliTPCCalROC *ROCoutliers=0, Bool_t robust=kFALSE, Double_t chi2Threshold=5, Double_t robustFraction=0.7)

void	GlobalFit (const AliTPCCalROC *ROCoutliers, Bool_t robust, TVectorD &fitParam, TMatrixD &covMatrix, Float_t &chi2, Int_t fitType=1, Double_t chi2Threshold=5, Double_t robustFraction=0.7, Double_t err=1, EPadType padType=kAll)

Static Public Member Functions
static AliTPCCalROC *	CreateGlobalFitCalROC (TVectorD &fitParam, Int_t sector, EPadType padType=kAll, AliTPCCalROC *oldTPCCalROC=0)

static void	Test ()

Protected Member Functions
Double_t	GetNeighbourhoodValue (TLinearFitter fitterQ, Int_t row, Int_t pad, Int_t rRadius, Int_t pRadius, AliTPCCalROC const ROCoutliers, Bool_t robust, Double_t chi2Threshold, Double_t robustFraction)

void	GetNeighbourhood (TArrayI &rowArray, TArrayI &padArray, Int_t row, Int_t pad, Int_t rRadius, Int_t pRadius)

Protected Attributes
UInt_t	fSector
	sector number More...

UInt_t	fNChannels
	number of channels More...

UInt_t	fNRows
	number of rows More...

const UInt_t *	fkIndexes

Float_t *	fData
	Data. More...

Detailed Description

TPC calibration base class for one ROC.

Calibration base class for a single ROC Contains one float value per pad mapping of the pads taken form AliTPCROC

Definition at line 20 of file AliTPCCalROC.h.

Member Enumeration Documentation

enum AliTPCCalROC::EPadType

Enumerator
kAll
kOROCmedium
kOROClong

Definition at line 24 of file AliTPCCalROC.h.

enum AliTPCCalROC::EStatType

Enumerator
kMean
kMedian
kRMS
kMinElement
kMaxElement

Definition at line 23 of file AliTPCCalROC.h.

Constructor & Destructor Documentation

AliTPCCalROC::AliTPCCalROC ( )

Definition at line 45 of file AliTPCCalROC.cxx.

Referenced by CreateGlobalFitCalROC(), and LocalFit().

AliTPCCalROC::AliTPCCalROC ( UInt_t sector )

Constructor that initializes a given sector

Definition at line 60 of file AliTPCCalROC.cxx.

AliTPCCalROC::AliTPCCalROC ( const AliTPCCalROC & c )

AliTPCCalROC copy constructor

Definition at line 80 of file AliTPCCalROC.cxx.

AliTPCCalROC::~AliTPCCalROC ( )

virtual

AliTPCCalROC destructor

Definition at line 117 of file AliTPCCalROC.cxx.

Member Function Documentation

void AliTPCCalROC::Add ( Float_t c1 )

add c1 to each channel of the ROC

Definition at line 305 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalPad::Add(), AliTPCcalibDButil::CreateCEOutlyerMap(), AliTPCPreprocessor::ExtractPedestals(), AliTPCPreprocessor::ExtractPulser(), AliTPCcalibDB::InitDeadMap(), AliTPCcalibDButil::ProcessCEdata(), SetValue(), and Test().

void AliTPCCalROC::Add	(	const AliTPCCalROC *	roc,
		Double_t	c1 = `1`
	)

multiply AliTPCCalROC roc by c1 and add each channel to the coresponing channel in the ROC

pad by pad

Definition at line 319 of file AliTPCCalROC.cxx.

Bool_t AliTPCCalROC::Convolute	(	Double_t	sigmaPad,
		Double_t	sigmaRow,
		AliTPCCalROC *	outlierPad = `0`,
		TF1 *	fpad = `0`,
		TF1 *	frow = `0`
	)

convolute the calibration with function fpad,frow in range +-4 sigma

Definition at line 258 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalPad::Convolute(), and SetValue().

AliTPCCalROC * AliTPCCalROC::CreateGlobalFitCalROC	(	TVectorD &	fitParam,
		Int_t	sector,
		EPadType	padType = `kAll`,
		AliTPCCalROC *	oldTPCCalROC = `0`
	)

static

Create ROC with global fit parameters The origin of the fit function is the center of the ROC! loop over all channels, write fit values into new ROC and return it In 2015 different gain in medium and long pads New CalROC is created for medium pads. For long pads oldTPCCalROC already contains values for medium pads.

Definition at line 1013 of file AliTPCCalROC.cxx.

Referenced by CreateGainMap(), AliTPCcalibDButil::CreatePadTime0(), AliTPCCalPad::GlobalFit(), and SetValue().

void AliTPCCalROC::Divide ( const AliTPCCalROC * roc )

divide each channel of the ROC by the coresponding channel of 'roc'

pad by pad -

Definition at line 341 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalPad::Divide(), SetValue(), and Test().

void AliTPCCalROC::Draw ( Option_t * option = "" )

virtual

create histogram with values and draw it

Definition at line 624 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalPad::MakePadFromTree(), and SetValue().

Double_t AliTPCCalROC::GetLTM	(	Double_t *const	sigma = `0`,
		Double_t	fraction = `0.9`,
		AliTPCCalROC *const	outlierROC = `0`,
		EPadType	padType = `kAll`
	)

returns the LTM and sigma pads with value != 0 in outlierROC are not used for the calculation return 0 if no data is accepted by the outlier cuts LTM for different padType

Definition at line 469 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalPad::GetLTM(), MakeHisto1D(), MakeHisto2D(), MakeHistoOutliers(), AliTPCCalibViewer::MakeTree(), AliTPCcalibDB::MakeTree(), SetValue(), and Test().

Double_t AliTPCCalROC::GetMaxElement	(	AliTPCCalROC *const	outlierROC = `0`,
		EPadType	padType = `kAll`
	)		const

returns the MaxElement value of the ROC pads with value != 0 in outlierROC are not used for the calculation return 0 if no data is accepted by the outlier cuts

Definition at line 459 of file AliTPCCalROC.cxx.

Referenced by SetValue().

Double_t AliTPCCalROC::GetMean	(	AliTPCCalROC *const	outlierROC = `0`,
		EPadType	padType = `kAll`
	)		const

returns the mean value of the ROC pads with value != 0 in outlierROC are not used for the calculation return 0 if no data is accepted by the outlier cuts

Definition at line 419 of file AliTPCCalROC.cxx.

Referenced by AliTPCcalibDButil::CreatePadTime0(), MakeHisto1D(), MakeHisto2D(), AliTPCCalibViewer::MakeTree(), AliTPCcalibDB::MakeTree(), Print(), AliTPCcalibDButil::ProcessPulserVariations(), SetValue(), and Test().

Double_t AliTPCCalROC::GetMedian	(	AliTPCCalROC *const	outlierROC = `0`,
		EPadType	padType = `kAll`
	)		const

returns the median value of the ROC pads with value != 0 in outlierROC are not used for the calculation return 0 if no data is accepted by the outlier cuts

Definition at line 429 of file AliTPCCalROC.cxx.

Referenced by AliTPCcalibDButil::CreateCEOutlyerMap(), CreateGainMap(), AliTPCcalibDButil::CreatePadTime0CE(), AliTPCcalibDButil::CreatePulserOutlyerMap(), MakeHisto1D(), MakeHisto2D(), AliTPCCalibViewer::MakeTree(), AliTPCcalibDB::MakeTree(), Print(), SetValue(), and Test().

Double_t AliTPCCalROC::GetMinElement	(	AliTPCCalROC *const	outlierROC = `0`,
		EPadType	padType = `kAll`
	)		const

returns the MinElement value of the ROC pads with value != 0 in outlierROC are not used for the calculation return 0 if no data is accepted by the outlier cuts

Definition at line 449 of file AliTPCCalROC.cxx.

Referenced by SetValue().

UInt_t AliTPCCalROC::GetNchannels ( ) const

inline

Definition at line 34 of file AliTPCCalROC.h.

Referenced by Convolute(), CreateGainMap(), CreatePadObject(), AliTPCcalibDButil::CreatePadTime0CE(), AliTPCcalibDButil::CreatePulserOutlyerMap(), AliTPCcalibDB::InitAltroData(), LTMFilter(), AliTPCCalPad::MakePadFromTree(), MakeRes(), MedianFilter(), AliTPCcalibDButil::ProcessALTROConfig(), AliTPCcalibDButil::ProcessPulser(), AliTPCcalibDButil::ProcessQAData(), RebuildData(), AliTPCCalPad::SetCalROC(), Test(), and testRawReaderFastTPC().

UInt_t AliTPCCalROC::GetNchannelsMedium ( ) const

inline

Definition at line 35 of file AliTPCCalROC.h.

void AliTPCCalROC::GetNeighbourhood	(	TArrayI *&	rowArray,
		TArrayI *&	padArray,
		Int_t	row,
		Int_t	pad,
		Int_t	rRadius,
		Int_t	pRadius
	)

protected

AliTPCCalROC::GetNeighbourhood - PRIVATE in this function the window for LocalFit is determined

Definition at line 872 of file AliTPCCalROC.cxx.

Referenced by GetNeighbourhoodValue(), and SetValue().

Double_t AliTPCCalROC::GetNeighbourhoodValue	(	TLinearFitter *	fitterQ,
		Int_t	row,
		Int_t	pad,
		Int_t	rRadius,
		Int_t	pRadius,
		AliTPCCalROC *const	ROCoutliers,
		Bool_t	robust,
		Double_t	chi2Threshold,
		Double_t	robustFraction
	)

protected

AliTPCCalROC::GetNeighbourhoodValue - smoothing - PRIVATE in this function the fit for LocalFit is done

Definition at line 804 of file AliTPCCalROC.cxx.

Referenced by LocalFit(), and SetValue().

UInt_t AliTPCCalROC::GetNPads ( UInt_t row ) const

inline

UInt_t AliTPCCalROC::GetNrows ( ) const

inline

Double_t AliTPCCalROC::GetRMS	(	AliTPCCalROC *const	outlierROC = `0`,
		EPadType	padType = `kAll`
	)		const

returns the RMS value of the ROC pads with value != 0 in outlierROC are not used for the calculation return 0 if no data is accepted by the outlier cuts

Definition at line 439 of file AliTPCCalROC.cxx.

Referenced by AliTPCcalibDButil::CreatePulserOutlyerMap(), MakeHisto1D(), MakeHisto2D(), AliTPCCalibViewer::MakeTree(), AliTPCcalibDB::MakeTree(), Print(), SetValue(), and Test().

UInt_t AliTPCCalROC::GetSector ( ) const

inline

Definition at line 32 of file AliTPCCalROC.h.

Referenced by AliTPCPreprocessorOnline::AddComponent(), AliTPCcalibDButil::GetMeanAltro(), and AliTPCCalPad::SetCalROC().

Double_t AliTPCCalROC::GetStats	(	EStatType	statType,
		AliTPCCalROC *const	outlierROC = `0`,
		EPadType	padType = `kAll`
	)		const

returns the mean or median or RMS value depending on the statType of the ROC or medium or long pad region pads with value != 0 in outlierROC are not used for the calculation return 0 if no data is accepted by the outlier cuts

Definition at line 361 of file AliTPCCalROC.cxx.

Referenced by GetMaxElement(), GetMean(), GetMedian(), GetMinElement(), GetRMS(), AliTPCCalPad::GetStats(), and SetValue().

Float_t AliTPCCalROC::GetValue	(	UInt_t	row,
		UInt_t	pad
	)		const

inline

Definition at line 38 of file AliTPCCalROC.h.

Float_t AliTPCCalROC::GetValue ( UInt_t channel ) const

inline

Definition at line 39 of file AliTPCCalROC.h.

void AliTPCCalROC::GlobalFit	(	const AliTPCCalROC *	ROCoutliers,
		Bool_t	robust,
		TVectorD &	fitParam,
		TMatrixD &	covMatrix,
		Float_t &	chi2,
		Int_t	fitType = `1`,
		Double_t	chi2Threshold = `5`,
		Double_t	robustFraction = `0.7`,
		Double_t	err = `1`,
		EPadType	padType = `kAll`
	)

Makes a GlobalFit for the given sector and return fit-parameters, covariance and chi2 update of GlobalFit in 2015 to have different gain in OROC medium and long pads The origin of the fit function is the center of the ROC! fitType == 0: fit plane function fitType == 1: fit parabolic function ROCoutliers - pads with value !=0 are not used in fitting procedure chi2Threshold: Threshold for chi2 when EvalRobust is called robustFraction: Fraction of data that will be used in EvalRobust err: error of the data points

Definition at line 924 of file AliTPCCalROC.cxx.

Referenced by CreateGainMap(), AliTPCcalibDButil::CreatePadTime0(), AliTPCCalibCE::EndEvent(), AliTPCCalPad::GlobalFit(), and SetValue().

Bool_t AliTPCCalROC::IsInRange	(	UInt_t	row,
		UInt_t	pad
	)

inline

Definition at line 36 of file AliTPCCalROC.h.

Referenced by Convolute(), LTMFilter(), and MedianFilter().

AliTPCCalROC * AliTPCCalROC::LocalFit	(	Int_t	rowRadius,
		Int_t	padRadius,
		AliTPCCalROC *	ROCoutliers = `0`,
		Bool_t	robust = `kFALSE`,
		Double_t	chi2Threshold = `5`,
		Double_t	robustFraction = `0.7`
	)

MakeLocalFit - smoothing returns a AliTPCCalROC with smoothed data rowRadius and padRadius specifies a window around a given pad. The data of this window are fitted with a parabolic function. This function is evaluated at the pad's position. At the edges the window is shifted, so that the specified pad is not anymore in the center of the window. rowRadius - radius - rows to be used for smoothing padradius - radius - pads to be used for smoothing ROCoutlier - map of outliers - pads not to be used for local smoothing robust - robust method of fitting - (much slower) chi2Threshold: Threshold for chi2 when EvalRobust is called robustFraction: Fraction of data that will be used in EvalRobust

Definition at line 777 of file AliTPCCalROC.cxx.

Referenced by SetValue().

Bool_t AliTPCCalROC::LTMFilter	(	Int_t	deltaRow,
		Int_t	deltaPad,
		Float_t	fraction,
		Int_t	type,
		AliTPCCalROC *	outlierROC = `0`,
		Bool_t	doEdge = `kTRUE`
	)

Modify content of the class write LTM mean or median

Definition at line 204 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalPad::LTMFilter(), and SetValue().

TH1F * AliTPCCalROC::MakeHisto1D	(	Float_t	min = `4`,
		Float_t	max = `-4`,
		Int_t	type = `0`
	)

make 1D histo type -1 = user defined range 0 = nsigma cut nsigma=min 1 = delta cut around median delta=min

Definition at line 499 of file AliTPCCalROC.cxx.

Referenced by Draw(), and SetValue().

TH2F * AliTPCCalROC::MakeHisto2D	(	Float_t	min = `4`,
		Float_t	max = `-4`,
		Int_t	type = `0`
	)

make 2D histo type -1 = user defined range 0 = nsigma cut nsigma=min 1 = delta cut around median delta=min

Definition at line 545 of file AliTPCCalROC.cxx.

Referenced by Draw(), and SetValue().

TH2F * AliTPCCalROC::MakeHistoOutliers	(	Float_t	delta = `4`,
		Float_t	fraction = `0.7`,
		Int_t	mode = `0`
	)

Make Histogram with outliers mode = 0 - sigma cut used mode = 1 - absolute cut used fraction - fraction of values used to define sigma delta - in mode 0 - nsigma cut mode 1 - delta cut

Definition at line 594 of file AliTPCCalROC.cxx.

Referenced by SetValue().

Bool_t AliTPCCalROC::MedianFilter	(	Int_t	deltaRow,
		Int_t	deltaPad,
		AliTPCCalROC *	outlierROC = `0`,
		Bool_t	doEdge = `kTRUE`
	)

Modify content of the object - raplace value by median in neighorhood

Definition at line 152 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalPad::MedianFilter(), and SetValue().

void AliTPCCalROC::Multiply ( Float_t c1 )

multiply each channel of the ROC with c1

Definition at line 312 of file AliTPCCalROC.cxx.

Referenced by CreateGainMap(), AliTPCcalibDB::InitDeadMap(), AliTPCCalPad::Multiply(), AliTPCcalibDButil::PulserOutlierMap(), SetValue(), and Test().

void AliTPCCalROC::Multiply ( const AliTPCCalROC * roc )

multiply each channel of the ROC with the coresponding channel of 'roc'

pad by pad -

Definition at line 330 of file AliTPCCalROC.cxx.

AliTPCCalROC & AliTPCCalROC::operator= ( const AliTPCCalROC & param )

assignment operator - dummy

Definition at line 99 of file AliTPCCalROC.cxx.

void AliTPCCalROC::Print ( Option_t * option = "" ) const

virtual

Definition at line 141 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalPad::Print().

void AliTPCCalROC::Reset ( void )

reset to ZERO

Definition at line 353 of file AliTPCCalROC.cxx.

Referenced by AliTPCCalROC(), AliTPCCalPad::Reset(), and SetValue().

void AliTPCCalROC::SetValue	(	UInt_t	row,
		UInt_t	pad,
		Float_t	vd
	)

inline

Definition at line 40 of file AliTPCCalROC.h.

Referenced by AliTPCCalibPedestal::Analyse(), AliTPCCalibPulser::Analyse(), AliTPCCalibCE::Analyse(), AliTPCCalPad::CreateCalPadFit(), AliTPCcalibDButil::CreateCEOutlyerMap(), CreateGainMap(), CreateGlobalFitCalROC(), CreatePadObject(), AliTPCcalibDButil::CreatePadTime0(), AliTPCcalibDButil::CreatePadTime0CE(), AliTPCcalibDButil::CreatePulserOutlyerMap(), AliTPCCalibCE::EndEvent(), AliTPCdataQA::FindLocalMaxima(), AliTPCCalibViewer::GetCalPad(), AliTPCCalibViewer::GetCalPadOld(), AliTPCCalibViewer::GetCalROC(), AliTPCcalibDB::InitDeadMap(), LocalFit(), AliTPCCalPad::MakeCalPadFromHistoRPHI(), AliTPCcalibDB::MakeDeadMap(), AliTPCCalPad::MakePadFromTree(), MakeRes(), AliTPCcalibDButil::ProcessCEdata(), AliTPCcalibDButil::PulserOutlierMap(), RebuildData(), Test(), testRawReaderFastTPC(), and AliTPCdataQA::Update().

void AliTPCCalROC::SetValue	(	UInt_t	channel,
		Float_t	vd
	)

inline

Definition at line 41 of file AliTPCCalROC.h.

void AliTPCCalROC::Test ( )

static

example function to show functionality and test AliTPCCalROC

Definition at line 643 of file AliTPCCalROC.cxx.

Referenced by SetValue().

Member Data Documentation

Float_t* AliTPCCalROC::fData

protected

Data.

Definition at line 85 of file AliTPCCalROC.h.

Referenced by Add(), AliTPCCalROC(), Convolute(), Divide(), GetLTM(), GetStats(), GetValue(), LTMFilter(), MedianFilter(), Multiply(), operator=(), Reset(), SetValue(), and ~AliTPCCalROC().

const UInt_t* AliTPCCalROC::fkIndexes

protected

! indexes

Definition at line 83 of file AliTPCCalROC.h.

Referenced by AliTPCCalROC(), Convolute(), GetLTM(), GetNchannelsMedium(), GetStats(), GetValue(), IsInRange(), LTMFilter(), MedianFilter(), operator=(), SetValue(), and ~AliTPCCalROC().

UInt_t AliTPCCalROC::fNChannels

protected

number of channels

Definition at line 81 of file AliTPCCalROC.h.

Referenced by Add(), AliTPCCalROC(), Convolute(), Divide(), GetLTM(), GetNchannels(), GetStats(), GetValue(), IsInRange(), LTMFilter(), MedianFilter(), Multiply(), operator=(), Reset(), and SetValue().

UInt_t AliTPCCalROC::fNRows

protected

number of rows

Definition at line 82 of file AliTPCCalROC.h.

Referenced by AliTPCCalROC(), Convolute(), GetNPads(), GetNrows(), GetValue(), IsInRange(), LTMFilter(), MakeHisto1D(), MakeHisto2D(), MakeHistoOutliers(), MedianFilter(), operator=(), and SetValue().

UInt_t AliTPCCalROC::fSector

protected

sector number

Definition at line 80 of file AliTPCCalROC.h.

Referenced by AliTPCCalROC(), GetLTM(), GetNchannelsMedium(), GetNeighbourhoodValue(), GetNPads(), GetSector(), GetStats(), GlobalFit(), LocalFit(), MakeHisto1D(), MakeHisto2D(), MakeHistoOutliers(), operator=(), Print(), and ~AliTPCCalROC().

The documentation for this class was generated from the following files:

TPC/TPCbase/AliTPCCalROC.h
TPC/TPCbase/AliTPCCalROC.cxx

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Detailed Description

Member Enumeration Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation